CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7_CENCI (Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11 Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--SNCSLHFIIRS 460 L+K++++GDSGVGK+ L+ + + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+ +N F+I++ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA 110
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7B_BOVIN (Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11 Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 2 Query: 161 IKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 +KL++IG GVGK+ LL R + I L+ +KLQIWDT GQERFR++ + +Y+G+ G +L +DVTD SF + Sbjct: 9 LKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEA 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: YPT7_SCHPO (GTP-binding protein ypt7 OS=Schizosaccharomyces pombe GN=ypt7 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+K++++G+SGVGK+ ++ + + + +D K + LQ+WDTAGQERF+++ A+YRGA +LVYDV + SF + Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFET 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7A_RAT (Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/91 (36.26%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+K++++GDSGVGK+ L+ + + + +D + + +QIWDTAGQERF+++ A+YRGA +LV+DVT ++F + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7A_PONAB (Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/91 (36.26%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+K++++GDSGVGK+ L+ + + + +D + + +QIWDTAGQERF+++ A+YRGA +LV+DVT ++F + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/91 (36.26%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+K++++GDSGVGK+ L+ + + + +D + + +QIWDTAGQERF+++ A+YRGA +LV+DVT ++F + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/91 (36.26%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+K++++GDSGVGK+ L+ + + + +D + + +QIWDTAGQERF+++ A+YRGA +LV+DVT ++F + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/91 (36.26%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+K++++GDSGVGK+ L+ + + + +D + + +QIWDTAGQERF+++ A+YRGA +LV+DVT ++F + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB7A_BOVIN (Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/91 (36.26%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+K++++GDSGVGK+ L+ + + + +D + + +QIWDTAGQERF+++ A+YRGA +LV+DVT ++F + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB5B_DICDI (Putative ras-related protein Rab-5B OS=Dictyostelium discoideum GN=rab5B PE=5 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 33/89 (37.08%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 KL+L+G+ GK+C+ R ++++ +D IKL+IWDTAGQER+R++T YYRGA ++VYD+T +++F + Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGPTDSTIGAAFL-VKSMVVDNINIKLEIWDTAGQERYRSLTPMYYRGAAAAVVVYDITKKNTFET 138 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |