CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.717e-25 Identity = 62/116 (53.45%), Postives = 78/116 (67.24%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF ++ +R++D A D +L+G Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFE---NISKWLRNIDEHANEDVERMLLG 121 HSP 2 Score: 70.0922 bits (170), Expect = 1.791e-11 Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 684 DIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 +I W+RNI++HA+++V ++L+GNK DMD+ KR VP KG +A E+GI+FFETSA Sbjct: 99 NISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSA 153
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.854e-25 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 K+LLIGDSGVGKSCLLLR KI+T+ LDGK IKLQIWDTAGQERFRTIT++YYRGA GI+LVYD TD+ SF + Sbjct: 12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTN 100
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 6.339e-25 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L KLLLIGDS VGKSC LLR KIRT+E++GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+TD SFN+ Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNN 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.280e-25 Identity = 59/91 (64.84%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L KLLLIGDS VGKSCLLLR KIRTIE DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD T+ SFN+ Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNN 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 8.280e-25 Identity = 59/89 (66.29%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 L KLLLIGDSGVGKSCLLLR KI+TIELDGK IKLQIWDTAGQERF TIT++YYRGA G L+VYDVTD+ S+ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESY 96
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.280e-25 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF + Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFEN 99
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF-NSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N LH I ++ D D IL+G Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-----DVCRILVG 119
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF-NSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N LH I ++ D D IL+G Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-----DVCRILVG 119
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF-NSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N LH I ++ D D IL+G Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-----DVCRILVG 119
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.252e-21 Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 + KLL+IG+S VGK+ L R K++T+ KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YDVT+E SFNS Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNS 111 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |