CK934124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_ARATH (Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN=At1g60970 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.386e-64 Identity = 71/102 (69.61%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 FVTGGE+ENELILA+VL+G FDAV LLLR NVDK+EA +DGGI+LETDANVIAGK +S D APLSEQTISQALATAREHLTRSL+K Sbjct: 76 FVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177 HSP 2 Score: 130.954 bits (328), Expect = 7.386e-64 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 3 Query: 159 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 M+ P +KNILLLDSEGKRVAVKYYS+DWPTNSA+EAFEK+VFTKTQKTNARTE E+ LE N++VYKFVQDLHF G Sbjct: 1 MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNIVVYKFVQDLHFFVTG 79
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ2_ORYSJ (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica GN=COPZ2 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.117e-60 Identity = 70/102 (68.63%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 FVT G+DENELI+A VLQGF D+VGLLLRG+V+K+ A VDGGIILETDAN IAGKVA+++VD AP SEQTISQALATAREHL RSLLK Sbjct: 81 FVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILLCIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182 HSP 2 Score: 121.324 bits (303), Expect = 6.117e-60 Identity = 55/76 (72.37%), Postives = 69/76 (90.79%), Query Frame = 3 Query: 156 SMDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHF 383 S ++CPS+KNILLLDSEGKRVAVKY+S+DW +N++K AFEK+VFTKT KTNAR+EAEI + +G ++VYKFVQDLHF Sbjct: 5 SKESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLFDGYIVVYKFVQDLHF 80
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ2_ARATH (Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN=At3g09800 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.040e-59 Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 3 Query: 156 SMDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 S D+CP +KNILLLDSEGKRVAVKYYS+DWPTN+AK +FEK VF+KT KTNARTEAEI +L+ N+IVYKF QDLHF G Sbjct: 2 SPDSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNIIVYKFAQDLHFFVTG 81 HSP 2 Score: 124.02 bits (310), Expect = 1.040e-59 Identity = 66/101 (65.35%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 685 FVTGGE+ENELILA+VLQGFFDAV LLLR NV+K EA VD G++LETD NVIAGKVA S + LSEQT++QALATAREHL RSLL Sbjct: 78 FVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ3_ARATH (Coatomer subunit zeta-3 OS=Arabidopsis thaliana GN=At4g08520 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.133e-58 Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 3 Query: 162 DTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 D+CP +KNILLLDSEGKRVAVKYYS+DW TN++K AFEK VF+KT KTNARTEAEI +LE N++VYKF QDLHF G Sbjct: 6 DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLESNIVVYKFAQDLHFFVTG 83 HSP 2 Score: 123.635 bits (309), Expect = 1.133e-58 Identity = 65/101 (64.36%), Postives = 75/101 (74.26%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 685 FVTGGE+ENEL+L++VLQGFFDAV LLLR NV+K EA VD G++LETDANVIAGKVA S + LSEQT++QALATAREHL RSLL Sbjct: 80 FVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_ORYSJ (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica GN=COPZ1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.460e-55 Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 3 Query: 159 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 M++CPS+KNILLLDSEGKRVAVKYY++DWPT SAK AFEK+VF KTQK A EAEI M +G+++VYKF+QDLHF G Sbjct: 1 MESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHIVVYKFIQDLHFFVTG 79 HSP 2 Score: 115.931 bits (289), Expect = 1.460e-55 Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 685 FVTGGE+ENELILA+VLQGF DAV ++LR NVDK+ A VDGGI+LET+ +VIA KV++H ++ L+EQTI QAL TAREHLT+SLL Sbjct: 76 FVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ3_ORYSJ (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica GN=Os01g0838800 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.001e-50 Identity = 56/79 (70.89%), Postives = 69/79 (87.34%), Query Frame = 3 Query: 159 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 M++CPS+KNIL+LDSEGKRVAVKYYS+DWP+ S+K+AFEK+VF KTQKT+ARTEAEI M + +VYKF+QDLHF G Sbjct: 1 MESCPSVKNILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKFIQDLHFFVTG 79 HSP 2 Score: 98.5969 bits (244), Expect = 1.001e-50 Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSL 682 FVTGG++ENELILA+VLQGF +A+ LLR V ++ A VDGGI+LETDA I KV+ H ++ L+EQ +S ALATAREH RS+ Sbjct: 76 FVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDGGIVLETDAKAILEKVSGHGLEGSGSLTEQKLSSALATAREHFARSI 175
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_BOVIN (Coatomer subunit zeta-1 OS=Bos taurus GN=COPZ1 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.731e-26 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 +V G ENEL+L TVL FD++ +LR NV+K+ VDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 78 YVIGSSYENELMLMTVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177 HSP 2 Score: 67.3958 bits (163), Expect = 1.731e-26 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 ++K IL+LD++G R+ KYY + +P+ ++AFEK +F KT RT++EIA+LEG +VYK DL+F +G Sbjct: 12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_PONAB (Coatomer subunit zeta-1 OS=Pongo abelii GN=COPZ1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.468e-26 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 +V G ENEL+L VL FD++ +LR NV+K+ VDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 78 YVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177 HSP 2 Score: 67.3958 bits (163), Expect = 6.468e-26 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 ++K IL+LD++G R+ KYY + +P+ ++AFEK +F KT RT++EIA+LEG +VYK DL+F +G Sbjct: 12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_MOUSE (Coatomer subunit zeta-1 OS=Mus musculus GN=Copz1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.468e-26 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 +V G ENEL+L VL FD++ +LR NV+K+ VDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 78 YVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177 HSP 2 Score: 67.3958 bits (163), Expect = 6.468e-26 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 ++K IL+LD++G R+ KYY + +P+ ++AFEK +F KT RT++EIA+LEG +VYK DL+F +G Sbjct: 12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_HUMAN (Coatomer subunit zeta-1 OS=Homo sapiens GN=COPZ1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.468e-26 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 +V G ENEL+L VL FD++ +LR NV+K+ VDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 78 YVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177 HSP 2 Score: 67.3958 bits (163), Expect = 6.468e-26 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 ++K IL+LD++G R+ KYY + +P+ ++AFEK +F KT RT++EIA+LEG +VYK DL+F +G Sbjct: 12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81 The following BLAST results are available for this feature:
BLAST of CK934124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934124 ID=CK934124; Name=CK934124; organism=Citrus sinensis; type=EST; length=847bpback to top |