CK934124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ2_MOUSE (Coatomer subunit zeta-2 OS=Mus musculus GN=Copz2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.951e-22 Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 380 LFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 L+V G ENEL+L +VL FD++ +LR NV+K+ VDGG+ILE+D + KV + D G L+EQ+++Q L +A+E + SLLK Sbjct: 105 LYVVGSSSENELMLMSVLACLFDSLSHILRKNVEKRWLLENMDGAFLVLDETVDGGVILESDPQQVIQKVNFRTDDSG--LTEQSVAQVLQSAKEQIKWSLLK 205 HSP 2 Score: 58.9214 bits (141), Expect = 2.951e-22 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 +IK + +LD++G+R+ KYY + +P+ + FEK VF KT +RTE+EIA L G IVYK D+ +G Sbjct: 40 TIKAVFILDNDGRRLLAKYYDDTFPSVKEQMVFEKNVFNKT----SRTESEIAFLGGMTIVYKSSIDIFLYVVG 109
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ2_HUMAN (Coatomer subunit zeta-2 OS=Homo sapiens GN=COPZ2 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.096e-21 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 380 LFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 L+V G ENEL+L +VL F+++ +LR NV+K+ VDGG+ILE+D + KV + D G L+EQ+++Q L +A+E + SLLK Sbjct: 110 LYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFLVLDEIVDGGVILESDPQQVIQKVNFRADDGG--LTEQSVAQVLQSAKEQIKWSLLK 210 HSP 2 Score: 58.151 bits (139), Expect = 4.096e-21 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 3 Query: 174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 +IK + +LD++G+R+ KYY + +P+ + FEK VF KT +RTE+EIA G IVYK DL +G Sbjct: 45 TIKAVFILDNDGRRLLAKYYDDTFPSMKEQMVFEKNVFNKT----SRTESEIAFFGGMTIVYKNSIDLFLYVVG 114
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ_CAEEL (Probable coatomer subunit zeta OS=Caenorhabditis elegans GN=F59E10.3 PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.094e-17 Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 174 SIKNILLLDSEGKRVAVKYYS-NDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 SIK I++LD +G RV KYY + T ++AFEK++F+KT + T A+I +L+G +Y+ DL+F LG Sbjct: 13 SIKGIVILDQDGNRVLAKYYDRTTFGTVKEQKAFEKSLFSKTSR---NTSADILLLDGVTCLYRSNVDLYFYVLG 84 HSP 2 Score: 55.4546 bits (132), Expect = 1.094e-17 Identity = 38/106 (35.85%), Postives = 52/106 (49.06%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQA----LATAREHLTRSLLK 688 +V G ENEL L L +DAV ++LR NV+KK D GII+ETDA + + A S +V S+Q++SQ + +A E SLLK Sbjct: 81 YVLGSTRENELFLDATLTCLYDAVSVVLRKNVEKKALIDSMDTIMLIIDEICDEGIIMETDAQAVVQRTALKSDEVS--FSDQSVSQIGFSFMKSANEQFKWSLLK 184
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZA_DICDI (Probable coatomer subunit zeta-A OS=Dictyostelium discoideum GN=copza PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 8.169e-14 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 174 SIKNILLLDS-EGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 ++ + +LDS +G+RV KYY+ND+ T ++AFEK VF KT K N EI +L+ ++VYK ++ +G Sbjct: 7 TVTSFFILDSSKGERVIAKYYNNDFDTLQKQKAFEKKVFDKTSKVN--FGGEITLLDNYLVVYKSFSNIIIYMVG 79 HSP 2 Score: 44.2838 bits (103), Expect = 8.169e-14 Identity = 27/98 (27.55%), Postives = 51/98 (52.04%), Query Frame = 2 Query: 380 LFVTGGEDENELILATVLQGFFDAV-GLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHL 670 +++ G +++NE+ L VL F D + L ++KK +DGGII+E+D+ VIA +V + D +++I++A+ + +E L Sbjct: 75 IYMVGDQNQNEIALLYVLNSFIDTLQNLFENSQINKKLILDGINYTLLTLDEIIDGGIIMESDSAVIADRVGIKAPDNDD--LDESINKAVTSVKEQL 170
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ_SCHPO (Probable coatomer subunit zeta OS=Schizosaccharomyces pombe GN=ret3 PE=2 SV=1) HSP 1 Score: 47.7506 bits (112), Expect = 1.519e-11 Identity = 30/106 (28.30%), Postives = 50/106 (47.17%), Query Frame = 2 Query: 383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKV----ASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688 ++ GG +ENE++L L+ DA+ LL + DK+ +D G+ILET+ +IA +V S + + + E + ARE +T +LK Sbjct: 82 YIVGGMEENEVMLYECLRSIRDALELLFKYVPDKRTLLENYDQLVIVVDETIDDGVILETEPALIAARVTKGPVSEAQAIVSDFKEMGFMNSFQKAREKITERILK 187 HSP 2 Score: 42.743 bits (99), Expect = 1.519e-11 Identity = 30/86 (34.88%), Postives = 43/86 (50.00%), Query Frame = 3 Query: 165 TCPSIKNILLLDSEGKRVAVKYYS-------NDWPTNSAKE--AFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395 T ++ L+LDS GKR+ KYY+ NS KE FEK +F KT K T+ +I +G ++V V D+ F +G Sbjct: 4 TLYAVNAFLILDSSGKRIFTKYYAPPHLKEGEGGVFNSVKEEKTFEKGLFEKTWK----TQNDILTYDGKLVVMLTVMDVIFYIVG 85 The following BLAST results are available for this feature:
BLAST of CK934124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934124 ID=CK934124; Name=CK934124; organism=Citrus sinensis; type=EST; length=847bpback to top |