CK934151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.580e-11 Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 180 RFRECELIHGRWAMLATLGALTVEWLT--GI-----TWQDAGKVELVEGS-SYLGQPLPFSITTLIWI---EVLVIDYIEFQRNSELDP----EKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 R RE E+IH RWAML LG + E L G+ W AG +G YLG P +++ I +V+++ +E R + P E LYPGG F DPLGLA DPE A L++ E+++ RL Sbjct: 94 RNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSF-DPLGLATDPEAFAELKVKELKNGRL 221
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.580e-11 Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 180 RFRECELIHGRWAMLATLGALTVEWL--TGI-----TWQDAGKVELVEGS-SYLGQPLPFSITTLIWI---EVLVIDYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 R RE E+IH RWAML LG E L G+ W AG EG YLG P +++ I +V+++ ++E R LDP LYPGG F DPLGLA DP+ A L++ E+++ RL Sbjct: 93 RNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDP---LYPGGAF-DPLGLADDPDSFAELKVKELKNGRL 219
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 180 RFRECELIHGRWAMLATLGALTVEWLT--GIT-----WQDAGKVELVEGS-SYLGQPLPFSITTLIWI---EVLVIDYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 R RE E+IH RWAML LG + E L+ G+T W AG EG YLG P +++ I +V+++ ++E R LD ++YPGG F DPLGLA DPE A L++ EI++ RL Sbjct: 93 RNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLD---KIYPGGAF-DPLGLADDPEAFAELKVKEIKNGRL 219
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 180 RFRECELIHGRWAMLATLGALTVEWLT--GIT-----WQDAGKVELVEGS-SYLGQPLPFSITTLIWI---EVLVIDYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 R RE E+IH RWAML LG + E L+ G+T W AG EG YLG P +++ I +V+++ ++E R LD ++YPGG F DPLGLA DPE A L++ EI++ RL Sbjct: 65 RNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLD---KIYPGGAF-DPLGLADDPEAFAELKVKEIKNGRL 191
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 186 RECELIHGRWAMLATLGALTVEWLTGIT--------WQDAGKVELVEGS-SYLGQPLPF---SITTLIWIEVLVIDYIEFQRNSELD---PEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 R E+IHGRWAML LG + E L W AG +G YLG P SI ++ +V+++ +E R + L LYPGG++FDPLGLA DP A L++ EI++ RL Sbjct: 93 RALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRL 219
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 52/129 (40.31%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 186 RECELIHGRWAMLATLGALTVEWLT--GI-----TWQDAGKVELVEGS-SYLGQPLPFSITTL--IW-IEVLVIDYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 RE E+IH RWAML LG + E L G+ W AG EG YLG P ++ IW ++V+++ +E R +DP LYPGG F DPLGLA DPE A L++ EI++ RL Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGAF-DPLGLADDPEAFAELKVKEIKNGRL 219
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 53/129 (41.09%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 186 RECELIHGRWAMLATLGALTVEWLT--GI-----TWQDAGKVELVEGS-SYLGQPLPFSITTLIWI---EVLVIDYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 RE E+IH RWAML LG + E L+ G+ W AG EG YLG P +++ I +V+++ IE R LDP LYPGG F DPLGLA DPE A L++ EI++ RL Sbjct: 94 RELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDP---LYPGGAF-DPLGLADDPEAFAELKVKEIKNGRL 218 The following BLAST results are available for this feature:
BLAST of CK934151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934151 ID=CK934151; Name=CK934151; organism=Citrus sinensis; type=EST; length=522bpback to top |