CK934157

Overview
NameCK934157
Unique NameCK934157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:413..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.798e-42
Identity = 86/113 (76.11%), Postives = 93/113 (82.30%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G VK F  +  Y R  GGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAV
Sbjct:  101 ISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSS-YYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 212
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.654e-42
Identity = 86/113 (76.11%), Postives = 92/113 (81.42%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G VK F  +  Y R  GGAN +A GY  G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAV
Sbjct:   99 ISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSS-YYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAV 210
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.140e-42
Identity = 86/113 (76.11%), Postives = 93/113 (82.30%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARK+SL RAL YM  Q LGAICG  +VKGF  +G Y R  GGAN V+ GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAV
Sbjct:  105 ISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQ-SGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAV 216
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.140e-42
Identity = 85/113 (75.22%), Postives = 95/113 (84.07%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            +SGGHINPAVT GLFLARK+SL RA+ Y+V Q LGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAV
Sbjct:  106 VSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAF-YVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAV 217
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.389e-41
Identity = 85/113 (75.22%), Postives = 91/113 (80.53%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G VK F  +  Y    GGAN +A GY  G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAV
Sbjct:   99 ISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSS-HYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAV 210
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 2.619e-40
Identity = 83/113 (73.45%), Postives = 92/113 (81.42%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GL LARK+S+ RA+ Y+V QCLG I G G+VKG M   QY    GGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAV
Sbjct:   96 ISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAV 207
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.420e-40
Identity = 81/113 (71.68%), Postives = 92/113 (81.42%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLA K+SL RA+ YMV QCLGA CG G+VK F     Y R  GGAN+++ GY  G G+GAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGF+V
Sbjct:  100 ISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQST-YYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSV 211
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 5.834e-40
Identity = 82/113 (72.57%), Postives = 92/113 (81.42%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GL LARK++L RA+ YMV QCLGAICG  +VK F  A  + R  GGAN ++ GY+ G G+ AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAV
Sbjct:  100 ISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSA-YFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 211
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 8.424e-39
Identity = 78/113 (69.03%), Postives = 89/113 (78.76%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            +SGGHINPAVTLGLF  RKLSL R + Y+V QCLGAI GAG+VKG M    Y  L GGAN V+ GY+    LGAEI+GTF+LVYTVFSATD KR+ARDS +P+L PLPIGFAV
Sbjct:  103 VSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKR-PYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAV 214
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.181e-38
Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGH+NPAVT  + LAR++SL RA  Y + QC+GA+CGAG+ +   G GQY R  GGAN +A GY+ G G+ AE++GTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV
Sbjct:   90 ISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAV 202
The following BLAST results are available for this feature:
BLAST of CK934157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
PIP21_ARATH2.798e-4276.11Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP22_ARATH3.654e-4276.11Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP26_MAIZE8.140e-4276.11Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP23_ORYSJ8.140e-4275.22Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_ARATH1.389e-4175.22Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP26_ORYSJ2.619e-4073.45Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP26_ARATH3.420e-4071.68Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH5.834e-4072.57Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ8.424e-3969.03Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ4.181e-3865.49Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934157 ID=CK934157; Name=CK934157; organism=Citrus sinensis; type=EST; length=342bp
CATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTTGG
CGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAGTGT
CTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCGG
CCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTACA
CCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTGTC
TACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCTCA
TGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTT
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