CK934157

Overview
NameCK934157
Unique NameCK934157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:413..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.721e-12
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPI 328
            +SG HINPAVT GL +   +S+ +A+FY+++QC+GAI G+ ++K    A   G L      +A G T   G   E   TFVL+  V S  D +R    +  P+   L I
Sbjct:   79 VSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLC--MTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRKNLGNAAPVAVGLAI 185          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGH+NPAVT G F+   +SL +A+ Y V Q LG++    ++K   G    G  +  A V A      + +  EI+ TF LVYTV+ +A D K+      + ++AP+ IGF V
Sbjct:   79 ISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGA-----WNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIV 183          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGH+NPAVT G F+   +SL +AL Y V Q LG++    ++K   G    G  +  A V A      + +  E++ TF LVYTV+ +A D K+      + ++AP+ IGF V
Sbjct:   79 ISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAM-----NAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIV 183          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.956e-11
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAV 340
            +SGGH+NPAVT    +  ++S+ RA++Y V Q +GAI    +++    G    G +         VA G ++  GL  EII TF LVY V+S A D KR +    + I+APL IG  V
Sbjct:   87 VSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIV 191          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.554e-11
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            +SG HINPAVTLG  +  ++S+ +A FY+++QC+GAI GA V+K  +     G L  G +           +  E + TF+LV+ V + +D  R      +   APL +G A+
Sbjct:   70 LSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL--GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAI 176          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.554e-11
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISG HINPAVT+   +   +S+ RA FY+  Q LGA+ GA ++     A   G LA   N +++  T G  +  E+  T  LV  +F++TD +R       P    L IGF+V
Sbjct:   62 ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLA--VNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSV 168          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.336e-11
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGH+NPAVT GL +  ++++   +FY + Q LG+     ++K   G      LA   + VA G    +G+  EII TF LVYTV+ +A D K+ +    +  +APL IG  V
Sbjct:   77 ISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIV 181          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.690e-11
Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-LGA---EIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGH+NPAVT G F+   ++L R + Y + Q LG++    ++K            GG  V A G + G G L A   EI+ TF LVYTV+ +A D K  +    +  +AP+ IGF V
Sbjct:   79 ISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK---------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIV 183          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.690e-11
Identity = 41/113 (36.28%), Postives = 57/113 (50.44%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISG H+NPAVT    +  ++SL RA+ YM  Q LGA+ GA V+     A   G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++
Sbjct:   62 ISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSL 168          
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.431e-11
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 2
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V
Sbjct:   77 ISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIV 181          
The following BLAST results are available for this feature:
BLAST of CK934157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
AQP_CICVR6.721e-1237.61Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP12_ORYSJ8.778e-1238.60Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE8.778e-1238.60Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP32_ARATH1.956e-1138.98Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP_DROME2.554e-1135.40Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
AQP2_HUMAN2.554e-1137.17Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
TIP21_ARATH3.336e-1138.60Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP11_ARATH5.690e-1138.98Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
MIP_RABIT5.690e-1136.28Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP2_TOBAC7.431e-1137.29Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934157 ID=CK934157; Name=CK934157; organism=Citrus sinensis; type=EST; length=342bp
CATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTTGG
CGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAGTGT
CTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCGG
CCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTACA
CCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTGTC
TACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCTCA
TGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTT
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