CK934173

Overview
NameCK934173
Unique NameCK934173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_SYNPW (Catalase-peroxidase OS=Synechococcus sp. (strain WH7803) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13
Identity = 70/242 (28.93%), Postives = 93/242 (38.43%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------------GRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWARNPLIFDNSYFTELLTGE 671
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K ++   IS+ADL  L+G V +E  G     F  GR+D  +P ++                  G L                      PD       +R+ F A+MG++ ++ VAL +GGHT G+CH                                      SG EG W  NP  +D  YF  + T E
Sbjct:   89 LFIRLAWHSAGTYRTGDGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKRKYGNAISWADLIILSGNVALESMGFRTFGFAGGREDIWQPEEDVFWGKETGWLKDERRNDKGELNQPLAAVEMGLIYVNPEGPHGEPDPVASGRDVRETF-ARMGMTVEETVALVAGGHTFGKCHGAAPDSHLEAEPEGAALHEQGLGWRNTYESGKGEHTITSGIEGAWKPNPTRWDQGYFQMMFTYE 329          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_COLP3 (Catalase-peroxidase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13
Identity = 62/178 (34.83%), Postives = 83/178 (46.63%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-----------------PQEGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVA-LSGGHTLGRCH 584
            PLM+R+AWHSAG Y V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  L+G V +E  G     F  GR D  EP                  ++G+L                      PD     + +R  FG +M ++D++IVA L+GGHTLG+ H
Sbjct:   99 PLMIRMAWHSAGVYRVHDGRGGASGGQQRFAPLNSWPDNVNLDKARRLLWPVKQKYGRKISWADLMVLSGNVALESMGFKTFGFAGGRTDDWEPDLVYWGPETAMLSDKRRDKKGKLKGPLAAVEMGLIYVNPEGPHGKPDPLLAANDIRMSFG-RMAMNDEEIVALLAGGHTLGKAH 275          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: PEM1_PHACH (Manganese peroxidase 1 OS=Phanerochaete chrysosporium GN=MNP1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 58/189 (30.69%), Postives = 85/189 (44.97%), Query Frame = 3
Query:  237 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHK-ERSGFEGPWARNPLIFDNSYFTELL-----------------------TGEKDGLLQLPSDKALLDDP 722
            GG  G+M L    E   SANNG+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +K     +G +P+ +     + Q F    G +  ++V+L   H++ R  K +++    P+   P  FD   F E+L                       +G   G ++L SD AL  DP
Sbjct:   82 GGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQSDFALAHDP 270          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_PSEMY (Catalase-peroxidase OS=Pseudomonas mendocina (strain ymp) GN=katG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 70/244 (28.69%), Postives = 97/244 (39.75%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRL--------PDAKQGND--HLRQVFGA-------------------------------QMGLSDKDIVAL-SGGHTLGRCH-----------------------------------KERSGFEGPWARNPLIFDNSYFTELLTGE 671
            P  +R+AWHSAGTY     + GG  G  R A   +   N  +D + RLL P K+++  +IS+ADLY LAG V +E  G     F  GR+D  EP Q+            D K+ ND   L   FGA                               +M ++D++IVAL +GGHT G+ H                                      SG E  W + P ++ N++F  L   E
Sbjct:   84 PQFIRMAWHSAGTYRTTDGRGGGGRGQQRFAPLNSWPDNVNIDKSRRLLWPIKQKYGQSISWADLYILAGNVALESMGFRTFGFGAGREDVWEPDQDVNWGAEVAWLGVDPKRVNDERELTAPFGATHMGLIYVNPEGPNASGDYLAAAKDIRATFYRMAMNDEEIVALIAGGHTFGKAHGAAPESHKGPEPEGAPIEAQGLGWTSNFGSGFGKDTVSSGLEVTWTKTPALWSNNFFENLFKFE 327          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_RHOBA (Catalase-peroxidase OS=Rhodopirellula baltica GN=katG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.450e-13
Identity = 60/179 (33.52%), Postives = 81/179 (45.25%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAKQGNDH---------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            PL +R+AWHSAGTY V    GG   GT R A   +   N  LD A RLL P K+++ + IS+ADL  L G   +E  G     F  GR+D  EP       P+   L D +   D                                  +R+ FG +M ++D++ VAL +GGHT G+ H
Sbjct:  200 PLFIRMAWHSAGTYRVSDGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNCALEDMGFETFGFAGGREDVWEPQKDVYWGPETEWLGDKRYSGDRDLQNPLAAVQMGLIYVNPEGPNGKPDPIAAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAH 377          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_ACIBY (Catalase-peroxidase OS=Acinetobacter baumannii (strain AYE) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_ACIBT (Catalase-peroxidase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=katG PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_ACIBC (Catalase-peroxidase OS=Acinetobacter baumannii (strain ACICU) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_ACIB5 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB0057) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_ACIB3 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB307-0294) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
The following BLAST results are available for this feature:
BLAST of CK934173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
KATG_SYNPW4.954e-1328.93Catalase-peroxidase OS=Synechococcus sp. (strain W... [more]
KATG_COLP34.954e-1334.83Catalase-peroxidase OS=Colwellia psychrerythraea (... [more]
PEM1_PHACH6.470e-1330.69Manganese peroxidase 1 OS=Phanerochaete chrysospor... [more]
KATG_PSEMY6.470e-1328.69Catalase-peroxidase OS=Pseudomonas mendocina (stra... [more]
KATG_RHOBA8.450e-1333.52Catalase-peroxidase OS=Rhodopirellula baltica GN=k... [more]
KATG_ACIBY1.104e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBT1.104e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBC1.104e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB51.104e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB31.104e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_E01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934173 ID=CK934173; Name=CK934173; organism=Citrus sinensis; type=EST; length=793bp
GGGGGTGCTCTGCTCGTGCCACCCTCGTTTGTTAAGGATTTGCGTCTCTC
TTTCTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGT
TAGCGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAG
GCTTCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGG
CACTCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGG
AACCATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCG
ATATTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATC
TCCTACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTAC
CGGTGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGC
CACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTG
AGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGC
TCTCTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGAT
TTGAGGGACCATGGGCCCGCAACCCTCTCATTTTTGACAATTCCTACTTC
ACGGAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGA
CAAGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTTGTGAGAAATATG
CTGCGGATGAGGACGCTTTCTTCGCTGATNNNGCTGAGGCTCA
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