CK934173

Overview
NameCK934173
Unique NameCK934173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_RHOPS (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB5) GN=katG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            LM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY L G V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   91 LMIRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERQLHDALGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 266          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_RHOPB (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB18) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY LAG V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   89 LFIRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGQKISWADLYVLAGNVALESMGFQTFGFAGGRADTWEPEELFWGPEGTWLGDERYSGERQLADPLGAVQMGLIYVNPEGPNGNPDPLGSAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 264          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_RHOP2 (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain HaA2) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            LM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY L G V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   91 LMVRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERELSDPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 266          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_NOCFA (Catalase-peroxidase OS=Nocardia farcinica GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 61/182 (33.52%), Postives = 82/182 (45.05%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------------------------GRL---PDAKQGND-------HLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N  PLM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR D  EP ++                              G +   P+   GN         ++  FG +MG++ ++ VAL +GGHT G+ H
Sbjct:   96 NYGPLMIRMAWHSAGTYRSSDGRGGANTGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQNISWADLMILAGNVALETMGFKTFGFAGGRVDVWEPEEDVYWGPEAEWLGDKRYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAAVDIKDTFG-RMGMTVEETVALIAGGHTFGKTH 276          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_STRGG (Catalase-peroxidase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 62/181 (34.25%), Postives = 81/181 (44.75%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 584
            N  PLM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   +S+ADL  L G V +E  G     F  GR+D  E        P+   L D +  G+  L    GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:  111 NYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLLILTGNVALETMGFKTFGFAGGREDVWESEEDVYWGPETTWLDDERYTGDRELENPLGAVQMGLIYVNPEGPNGNPDPVAAARDIRETFRRMAMNDEETVALIAGGHTFGKTH 291          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: PEM4_PHACH (Manganese peroxidase H4 OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 3
Query:  237 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE-GPWARNPLIFDNSYFTELL 662
            GG  G+M      E   SAN+G+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +   P  EG +P+ +     + Q F      S  ++V+L   HT+ R  K     +  P+   P  FD   F E+L
Sbjct:   85 GGADGSMLHFPTIEPNFSANSGIDDSVNNLLPFMQKHDTISAADLVQFAGAVALSNCPGAPRLEFMAGRPNTTIPAVEGLIPEPQDSVTKILQRFEDAGNFSPFEVVSLLASHTVARADKVDETIDAAPFDSTPFTFDTQVFLEVL 230          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_PECCP (Catalase-peroxidase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=katG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 71/245 (28.98%), Postives = 98/245 (40.00%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE--------------GRL-----------------------PDAKQGN-DHLR-----QVFGAQMGLSDKDIVALS-GGHTLGRCHKE-----------------------------------RSGFEGPWARNPLIFDNSYFTELLTGE 671
            LM+R+AWHSAGTY     + GG  G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG +  E  G     F  GR+D   P ++              GR                        P+   GN D LR     +V  ++M ++D++ VAL+ GGHT+G+ H                                      SG EG W  +P  +DN +F  LL  E
Sbjct:   92 LMIRMAWHSAGTYRTADGRGGGGTGNQRFAPLNSWPDNVSLDKARRLLWPIKKKYGNKLSWADLIILAGNIAYESMGLKTFGFAFGREDIWHPEKDIYWGSEKEWLAKSTGRYGSDDRTTLENPLAAVQMGLIYVNPEGVDGNPDPLRTAQDMRVTFSRMAMNDEETVALTAGGHTVGKTHGNGDASLLGKAPEGTDVGEQGLGWHNPTGSGKGRYTVTSGLEGAWTTHPTQWDNGFFHMLLNHE 336          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_SOLUE (Catalase-peroxidase OS=Solibacter usitatus (strain Ellin6076) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 63/176 (35.80%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 584
            LM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR D  EP      P+   L D +  G   L +  GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:   99 LMIRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPVKQKYGDKISWADLMVLAGNVALESMGFKTFGFAGGRSDVWEPEELYWGPEGTWLGDERYSGERQLSEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETFFRMAMNDEETVALIAGGHTFGKTH 274          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_BORA1 (Catalase-peroxidase OS=Bordetella avium (strain 197N) GN=katG PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 59/155 (38.06%), Postives = 74/155 (47.74%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQ--GNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWARNPL 629
            PL +R+AWHSAGTY V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  G     F  GR+D  EP Q+    D K   G D        + G ++   VA   GH  G+ H    G  G    NPL
Sbjct:   84 PLFIRMAWHSAGTYRVGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKKKYGNKISWADLFILTGNVALETMGFKTFGFGGGREDTWEPDQDVYWGDEKTWLGGD-------LRYGKNEAQPVADKAGH--GKEHGRTDG--GRNLENPL 227          
BLAST of CK934173 vs. ExPASy Swiss-Prot
Match: KATG_RHOP5 (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisA53) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 61/176 (34.66%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 584
            L +R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L+G V +E  G     F  GR D  EP      P+   L D++  G   L    GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:   90 LFIRLAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLFVLSGNVALESMGFKTFGFAGGRADTWEPEELYWGPEGTWLGDSRYSGERELSDPLGAVQMGLIYVNPEGPNGNPDPVGSAKDIRETFYRMAMNDEETVALIAGGHTFGKTH 265          
The following BLAST results are available for this feature:
BLAST of CK934173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
KATG_RHOPS4.194e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_RHOPB5.477e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_RHOP25.477e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_NOCFA5.477e-1233.52Catalase-peroxidase OS=Nocardia farcinica GN=katG ... [more]
KATG_STRGG7.154e-1234.25Catalase-peroxidase OS=Streptomyces griseus subsp.... [more]
PEM4_PHACH1.220e-1133.56Manganese peroxidase H4 OS=Phanerochaete chrysospo... [more]
KATG_PECCP1.220e-1128.98Catalase-peroxidase OS=Pectobacterium carotovorum ... [more]
KATG_SOLUE1.594e-1135.80Catalase-peroxidase OS=Solibacter usitatus (strain... [more]
KATG_BORA11.594e-1138.06Catalase-peroxidase OS=Bordetella avium (strain 19... [more]
KATG_RHOP52.718e-1134.66Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_E01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934173 ID=CK934173; Name=CK934173; organism=Citrus sinensis; type=EST; length=793bp
GGGGGTGCTCTGCTCGTGCCACCCTCGTTTGTTAAGGATTTGCGTCTCTC
TTTCTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGT
TAGCGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAG
GCTTCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGG
CACTCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGG
AACCATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCG
ATATTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATC
TCCTACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTAC
CGGTGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGC
CACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTG
AGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGC
TCTCTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGAT
TTGAGGGACCATGGGCCCGCAACCCTCTCATTTTTGACAATTCCTACTTC
ACGGAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGA
CAAGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTTGTGAGAAATATG
CTGCGGATGAGGACGCTTTCTTCGCTGATNNNGCTGAGGCTCA
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