CK934179

Overview
NameCK934179
Unique NameCK934179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.304e-21
Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            R F  IE+ K  VE+ CPGVVSCADIL ++ RD   A+GGP   +K GRRD   +   + E  LP   D ++
Sbjct:  102 RGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLN 173          

HSP 2 Score: 58.151 bits (139), Expect = 1.304e-21
Identity = 30/64 (46.88%), Postives = 36/64 (56.25%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L   FY +TCP A + IR  V+      +  A S +R  FHDC VQ CDAS+LLD T    SEK
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEK 92          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.697e-21
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S
Sbjct:   99 IRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLS 171          

HSP 2 Score: 55.4546 bits (132), Expect = 1.697e-21
Identity = 26/64 (40.62%), Postives = 34/64 (53.12%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L  NFY  TCP+  D ++  V+    + +    S LR  FHDC V  CDAS+LLD T     E+
Sbjct:   27 LSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQ 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 2.206e-21
Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            + S   S   R F  ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++   +L
Sbjct:   93 KNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTIL 177          

HSP 2 Score: 58.151 bits (139), Expect = 2.206e-21
Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L   +Y  +CPQ  +I+R  V     R    A S LR  FHDC VQ CD SLLLDS+ +  +EK
Sbjct:   30 LFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEK 93          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.869e-21
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            L+  FYK++CP AE+I++  +++   +    A S LR  FHDC V  CDAS+LLD+    LSEK+
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQ 94          

HSP 2 Score: 60.4622 bits (145), Expect = 2.869e-21
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            +R F  I+ IK  +E  CP  VSC+DIL L+ RD V   GGP+  +  GRRD  K+      Q++P  N S+  ++
Sbjct:  102 LRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLI 177          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.870e-21
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 1
Query:  277 PCLRRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSV 534
            P   ++   + G+R +  I++ K  +E  CPGVVSCADIL L+ RD VV  GG    + TGRRDGR S+A  +   LP  +DS+ V
Sbjct:   88 PATEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVSN-LPAPSDSVDV 172          

HSP 2 Score: 51.2174 bits (121), Expect = 2.870e-21
Identity = 27/63 (42.86%), Postives = 34/63 (53.97%), Query Frame = 3
Query:   96 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD--STRKT 278
            G  + FY  TCP+AE I+R  V+         A   LR  FHDC VQ CD S+L+   +T KT
Sbjct:   31 GTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPATEKT 93          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.871e-21
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR-AEILEQYLPDHNDSMSVV 537
            +R F +I+ +K A+E +CPG+VSCADI+ L+ RD +VA+GGP   + TGRRDGR S  AE +    P   +  +++
Sbjct:   97 VRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLI 172          

HSP 2 Score: 50.0618 bits (118), Expect = 2.871e-21
Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST 269
            L M FY  TCP AE I+++ V        + A   +R  FHDC V+ CD S+L+++T
Sbjct:   25 LKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINAT 81          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.873e-21
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 468
            +R F  I+ IK  VE+ CPG+VSCADIL ++ RD V+ LGGP   +K GRRD
Sbjct:   93 VRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRD 144          

HSP 2 Score: 58.9214 bits (141), Expect = 2.873e-21
Identity = 30/73 (41.10%), Postives = 38/73 (52.05%), Query Frame = 3
Query:   81 NEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            ++ +  L  +FYK++CP    ++R  VK    R      S LR  FHDC V  CD SLLLD T   L EK  G
Sbjct:   15 SQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSG 87          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 3.743e-21
Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++
Sbjct:   75 RGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLI 149          

HSP 2 Score: 50.8322 bits (120), Expect = 3.743e-21
Identity = 25/67 (37.31%), Postives = 30/67 (44.78%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+  G
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAG 68          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 4.855e-21
Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L  +FY+ +CP+AE+I+R  V   ++R    A S +R  FHDC VQ CD SLLLD++   ++EK
Sbjct:   35 LFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEK 98          

HSP 2 Score: 58.151 bits (139), Expect = 4.855e-21
Identity = 30/84 (35.71%), Postives = 42/84 (50.00%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVV 537
            + S   S   R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +      + LP+ ++    +
Sbjct:   98 KNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTI 181          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.857e-21
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 471
            +R F  I+N+K A+E+ECPG+VSC+D+L L  RD +VAL GP   ++TGRRDG
Sbjct:  102 LRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDG 154          

HSP 2 Score: 50.447 bits (119), Expect = 4.857e-21
Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 3
Query:   96 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK 275
            GL + FY   CP+AE I+++ V    K  +  A   LR  FHDC V+ C+ S+LL+   K
Sbjct:   31 GLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNK 90          
The following BLAST results are available for this feature:
BLAST of CK934179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PERX_NICSY1.304e-2145.83Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER4_VITVI1.697e-2145.21Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER49_ARATH2.206e-2136.47Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER20_ARATH2.869e-2144.62Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER2_ARAHY2.870e-2144.19Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER39_ARATH2.871e-2144.74Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER67_ARATH2.873e-2155.77Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PERP7_BRARA3.743e-2146.67Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER14_ARATH4.855e-2145.31Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER56_ARATH4.857e-2156.60Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934179 ID=CK934179; Name=CK934179; organism=Citrus sinensis; type=EST; length=540bp
AAATGGGTANTAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCA
GCTGTGTCTCTGAGGTCTGCTTTGGAAGAAAATGAAGAGGACCCAGGTCT
TGTTATGAATTTTTACAAGGATACCTGCCCTCAGGCCGAGGACATTATCA
GGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCT
TGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTC
ACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGCATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGGCAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTT
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