CK934179

Overview
NameCK934179
Unique NameCK934179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.858e-21
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A
Sbjct:   96 VRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNA 153          

HSP 2 Score: 51.9878 bits (123), Expect = 4.858e-21
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST 269
            L MNFY ++CP AE I+++ V        + A + +R  FHDC V+ CD S+L++ST
Sbjct:   26 LQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINST 82          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 6.324e-21
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1
Query:  304 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            +  +  F  I+N K+A+E +CPG+VSCADIL L+ RD V   GGP   +  GR+DGR S+A
Sbjct:   91 NISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKA 151          

HSP 2 Score: 55.8398 bits (133), Expect = 6.324e-21
Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            ++Y  TCPQA+ I+   VK      +    + LR  FHDC V+ CD S+LLDS  K  +EK+
Sbjct:   26 HYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKD 87          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 8.214e-21
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L   FY+ +CP+AE+I+R  V     R    A S +R  FHDC VQ CD SLLLD++   ++EK
Sbjct:   36 LFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEK 99          

HSP 2 Score: 60.077 bits (144), Expect = 8.214e-21
Identity = 30/85 (35.29%), Postives = 43/85 (50.59%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            + S   S   R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +        +P  N++ + ++
Sbjct:   99 KNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIV 183          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.068e-20
Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            +R F  I++IK  +E  CP  VSCADIL ++ RD VV  GGP   ++ GR+D R +  +     LP  N ++S ++
Sbjct:  122 LRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLI 197          

HSP 2 Score: 55.0694 bits (131), Expect = 1.068e-20
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 3
Query:   99 LVMNF--YKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            LV++F  Y+++CP+AE I+   V+         A S LR  FHDC V  CDAS+LLD T   + EK
Sbjct:   48 LVLDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEK 113          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.391e-20
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 1
Query:  298 DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPD 513
            ++S     F  +   K AVE +CPGVVSCADIL L+ RD VV +GGP   ++ GRRDG  S+A  +   LP+
Sbjct:   99 NKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPE 170          

HSP 2 Score: 53.5286 bits (127), Expect = 1.391e-20
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 3
Query:   84 EEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS 266
            E +  L  N+Y  TCP  E I+++ V   +K+   TA + LR  FHDC V+ CDAS+ + S
Sbjct:   27 ESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIAS 87          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.354e-20
Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            +FY D+CP     +R  V+    + +  A S LR  FHDC V  CDAS+LLD TR  L EK  G
Sbjct:   33 DFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAG 96          

HSP 2 Score: 59.3066 bits (142), Expect = 2.354e-20
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 468
            +R +  I+ IK  VER CPGVVSCADIL ++ RD V+ +GG    +K GRRD
Sbjct:  102 VRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRD 153          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.063e-20
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  304 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            +  +R F  I++ K A+E+ CPG+VSC+DIL L  RD +VAL GP   ++TGRRDGR S   I E  LP   D+++ ++
Sbjct:   93 NLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVS--NINEVNLPSPFDNITKLI 169          

HSP 2 Score: 50.447 bits (119), Expect = 3.063e-20
Identity = 24/56 (42.86%), Postives = 31/56 (55.36%), Query Frame = 3
Query:   96 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD 263
            GL + FY  TCPQ E I+++ V     +        LR  FHDC V+ CD S+LLD
Sbjct:   25 GLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLD 80          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.179e-20
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            +R F ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDGR S A   +Q  P
Sbjct:   95 LRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQLPP 160          

HSP 2 Score: 50.8322 bits (120), Expect = 5.179e-20
Identity = 23/61 (37.70%), Postives = 36/61 (59.02%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            FY ++CP  E ++R+++        + A   LR  FHDC V+ CD S+LLDS   + +EK+
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKD 88          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 6.728e-20
Identity = 32/85 (37.65%), Postives = 45/85 (52.94%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            +RS       R F  I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD R++      + +P    ++  +L
Sbjct:  104 KRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTIL 188          

HSP 2 Score: 54.6842 bits (130), Expect = 6.728e-20
Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            FY+++CP A+ I++  V   Y      A S LR  FHDC V  CDAS+LLDS+    SEK
Sbjct:   45 FYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEK 104          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.735e-20
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 480
            +R F ++E IK  +E+ CP  VSCADI+ L+ RD VVA GGP   + TGRRDGR S
Sbjct:   99 LRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRIS 154          

HSP 2 Score: 50.8322 bits (120), Expect = 6.735e-20
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST 269
            L MNFY  +CP AE II + ++       + A   +R  FHDC V+ CD S+L++ST
Sbjct:   29 LQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINST 85          
The following BLAST results are available for this feature:
BLAST of CK934179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PER3_ARATH4.858e-2155.17Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER64_ARATH6.324e-2149.18Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER15_ARATH8.214e-2145.31Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER40_ARATH1.068e-2039.47Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER55_ARATH1.391e-2047.22Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER68_ARATH2.354e-2045.31Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER27_ARATH3.063e-2045.57Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1_ORYSJ5.179e-2048.48Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER36_ARATH6.728e-2037.65Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER30_ARATH6.735e-2055.36Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934179 ID=CK934179; Name=CK934179; organism=Citrus sinensis; type=EST; length=540bp
AAATGGGTANTAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCA
GCTGTGTCTCTGAGGTCTGCTTTGGAAGAAAATGAAGAGGACCCAGGTCT
TGTTATGAATTTTTACAAGGATACCTGCCCTCAGGCCGAGGACATTATCA
GGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCT
TGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTC
ACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGCATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGGCAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTT
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