CK934179

Overview
NameCK934179
Unique NameCK934179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 8.763e-20
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR 483
            ++ +  ++  K A+ER+CP ++SCAD+L L  RD V  +GGP+ P+  GRRDGR S+
Sbjct:   96 LKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISK 152          

HSP 2 Score: 51.9878 bits (123), Expect = 8.763e-20
Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR 272
            L +++Y+  CP+AE+I+R        R K  A   LR  FHDC V+ CD S+LL S +
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAK 83          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.139e-19
Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 1
Query:  310 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVV 537
            G+R F  +E +K  +E  CPGVVSC+DI+ L+ RD +    GP   + TGRRDGR S   + +  +P+ +DS+ ++
Sbjct:   94 GVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKD-MPEVSDSIEIL 168          

HSP 2 Score: 48.521 bits (114), Expect = 1.139e-19
Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L + FY +TCPQAE I++  V        N     LR  FHDC V+ CD S+L+++    +SEK
Sbjct:   26 LEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNN--GAISEK 87          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 1.140e-19
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1
Query:  298 DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP
Sbjct:   89 DKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLP 161          

HSP 2 Score: 57.3806 bits (137), Expect = 1.140e-19
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEH 296
            L  NFY+ +CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+H
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDH 86          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.483e-19
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 1
Query:  304 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            +  +R+F  IE+ K  +E+ CP  VSCAD++ ++ RD V   GGPY  +  GR+DG  SRA
Sbjct:   94 NISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTISRA 154          

HSP 2 Score: 56.6102 bits (135), Expect = 1.483e-19
Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 3
Query:   90 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            +  L  ++Y  +CP AE II E V+             LR  FHDC ++ CDAS+LLDSTR   +EK+
Sbjct:   23 EAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKD 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.927e-19
Identity = 30/53 (56.60%), Postives = 35/53 (66.04%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 471
            +R F  I+ IK AVE  CPGVVSCADIL L+ RD V   GGP   +  GR+DG
Sbjct:   99 VRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDG 151          

HSP 2 Score: 53.1434 bits (126), Expect = 1.927e-19
Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST 269
            + Y  +CP    I+R+QVK+  K     A S +R  FHDC V  CDAS+LLD T
Sbjct:   33 DIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGT 86          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 2.505e-19
Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  271 ERPCLRRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILE 498
            E P   +   ++ G+  F  I+ IK  +E+ CPGVVSCADIL L+ RD V   G P  P+ TGRRDG  S  + ++
Sbjct:   91 EGPNSEKMAPQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD 166          

HSP 2 Score: 52.7582 bits (125), Expect = 2.505e-19
Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 3
Query:   99 LVMNFYK--DTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD 263
            L  ++YK  +TC  AE+ +R QV++ YK  K+ A   LR ++ DC V  CDAS+LL+
Sbjct:   35 LTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLE 91          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 4.233e-19
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVV 537
            R F  I+ +K AVE+ CP  VSCAD+L ++ +  VV  GGP   + +GRRD  +   ++    LP  + ++ V+
Sbjct:   99 RGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVL 172          

HSP 2 Score: 56.6102 bits (135), Expect = 4.233e-19
Identity = 28/62 (45.16%), Postives = 35/62 (56.45%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            +FY  TCPQ  DI    +K   +     A S LR  FHDC V  CDAS+LLD+T    +EK+
Sbjct:   29 SFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKD 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.234e-19
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            L   FY+ +CPQA++I+   ++    +    A S LR  FHDC VQ CDAS+LLD +    SEK  G
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAG 111          

HSP 2 Score: 56.9954 bits (136), Expect = 4.234e-19
Identity = 29/76 (38.16%), Postives = 41/76 (53.95%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            +R F+ I+ IK  +E+ CP  VSCADIL L+ R   +  GGP   L  GRRD R +        +P  N ++  +L
Sbjct:  117 VRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLL 192          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 4.236e-19
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 3
Query:   75 EENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR 272
            E N E  GL  ++Y+ TCP+ E+I+R  +  ++     +  + LR +FHDC VQ CDAS+LL+  R
Sbjct:   32 ETNNE--GLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIR 95          

HSP 2 Score: 57.3806 bits (137), Expect = 4.236e-19
Identity = 27/81 (33.33%), Postives = 47/81 (58.02%), Query Frame = 1
Query:  301 RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE-ILEQYLPDHNDSMSVVL 540
            ++FG+R    + +IK ++E ECP  VSC+D+++L+ RD V   GGP I +  GR+D   + ++ + +  LP     +   L
Sbjct:  106 KNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTL 186          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 4.238e-19
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 1
Query:  322 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 528
            F  +  IK A+E  CPGVVSCADIL  + RD V  +GGPY  +K GR+DG +S+A  +   +P  N ++
Sbjct:  109 FDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTV 177          

HSP 2 Score: 49.2914 bits (116), Expect = 4.238e-19
Identity = 22/62 (35.48%), Postives = 35/62 (56.45%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            ++Y+ TCP    I+RE V     +   TA   LR  FHDC ++ CDAS+L+ +     +E++
Sbjct:   36 DYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERD 97          
The following BLAST results are available for this feature:
BLAST of CK934179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PER1_ARATH8.763e-2045.61Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER43_ARATH1.139e-1940.79Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER16_ARATH1.140e-1943.84Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER66_ARATH1.483e-1944.26Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PERN_ARMRU1.927e-1956.60Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER26_ARATH2.505e-1943.42Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER2_ARMRU4.233e-1936.49Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER9_ARATH4.234e-1943.28Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER29_ARATH4.236e-1940.91Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER65_ARATH4.238e-1946.38Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934179 ID=CK934179; Name=CK934179; organism=Citrus sinensis; type=EST; length=540bp
AAATGGGTANTAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCA
GCTGTGTCTCTGAGGTCTGCTTTGGAAGAAAATGAAGAGGACCCAGGTCT
TGTTATGAATTTTTACAAGGATACCTGCCCTCAGGCCGAGGACATTATCA
GGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCT
TGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTC
ACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGCATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGGCAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTT
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