CK934179

Overview
NameCK934179
Unique NameCK934179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:50..588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 4.243e-19
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  GRRD   +        LP
Sbjct:   96 IRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLP 161          

HSP 2 Score: 53.9138 bits (128), Expect = 4.243e-19
Identity = 29/67 (43.28%), Postives = 32/67 (47.76%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            L  NFY   CP A   I+  V     +      S LR  FHDC VQ CDAS+LLD T     EK  G
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAG 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 5.517e-19
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  310 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVV 537
            G+  F  I+  K  +ER CPGVVSCADI+ L+ RD +    GP+  + TGRRDG  +  +  +  LPD  DS++ +
Sbjct:   93 GVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTL 167          

HSP 2 Score: 49.6766 bits (117), Expect = 5.517e-19
Identity = 23/54 (42.59%), Postives = 30/54 (55.56%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL 260
            L   FY +TCP AE I+R+ V+         A   LR  FHDC V+ CD S+L+
Sbjct:   24 LQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILI 77          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.168e-19
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            ++ F  IE+ K  +E  CPGVVSCADIL L+ RD VVA  G    + TGRRDGR SRA
Sbjct:  100 LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRA 157          

HSP 2 Score: 49.6766 bits (117), Expect = 7.168e-19
Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 3
Query:   96 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST 269
            G  + FY  TCP+AE I++  V+  ++     A   LR  FHDC V  CD S+L++ +
Sbjct:   31 GTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS 88          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.176e-19
Identity = 33/82 (40.24%), Postives = 46/82 (56.10%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            R S+      R F  I+  K AVE  CPGVVSCADI+ ++ RD    +GGP   +K GRRD   +   I ++ LP+   S++
Sbjct:   84 RDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLN 165          

HSP 2 Score: 49.6766 bits (117), Expect = 7.176e-19
Identity = 24/61 (39.34%), Postives = 33/61 (54.10%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            FY  TC  A   IR  ++    R +  A S +R  FHDC V  CDAS++L +T    SE++
Sbjct:   25 FYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERD 85          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 9.323e-19
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 471
            R F  I+ IK AVE  CPGVVSCADIL L+ RD VV  GGP   +  GR+DG
Sbjct:  100 RGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDG 151          

HSP 2 Score: 50.0618 bits (118), Expect = 9.323e-19
Identity = 24/52 (46.15%), Postives = 30/52 (57.69%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD 263
            + Y  +CP    I+R+QV +  K     A S +R  FHDC V  CDASLLLD
Sbjct:   33 DIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLD 84          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.211e-18
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQ 501
            +R F  I++IK  +E+ CPG VSCADIL  + R   V LGGPY P   GRRD + S A  +E+
Sbjct:  119 LRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK 181          

HSP 2 Score: 48.9062 bits (115), Expect = 1.211e-18
Identity = 24/55 (43.64%), Postives = 32/55 (58.18%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD 263
            L +N+Y   CP  E I+  +V+   K   +   + LR IFHDC V  CDAS+LLD
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLD 105          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.575e-18
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 1
Query:  277 PCLRRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILE 498
            P   R+  ++ G+  F  I+ IK+ +E  CPGVVSCADIL L+ RD V   G P  P+ TGRRDG    A+ ++
Sbjct:   93 PNSERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD 166          

HSP 2 Score: 47.7506 bits (112), Expect = 1.575e-18
Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 3
Query:   99 LVMNFYK--DTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL 260
            LV ++YK  +TC  AE  IR QV+  YK   + A   LR ++ DC V  CD S+LL
Sbjct:   35 LVWHYYKLTNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILL 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.049e-18
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD   +        +P   +S+S
Sbjct:  105 RGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLS 176          

HSP 2 Score: 55.4546 bits (132), Expect = 2.049e-18
Identity = 27/63 (42.86%), Postives = 33/63 (52.38%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            FY  TCP A  I+R  ++   +       S +R  FHDC V  CDAS+LLD T    SEK  G
Sbjct:   36 FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAG 98          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.051e-18
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            R F  + +IK  VE  CPG+VSCADIL ++ RDGVVALGGP   +  GRRD   S A
Sbjct:  102 RGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFA 158          

HSP 2 Score: 48.1358 bits (113), Expect = 2.051e-18
Identity = 25/57 (43.86%), Postives = 30/57 (52.63%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST 269
            L   FY  +CP A   IR  V    ++      S LR  FHDC V+ CDASLLL+ T
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDT 87          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 3.509e-18
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 3
Query:   93 PGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            PGL  +FYK +CP+AE I+R  V+   +R    A   LR  FHDC VQ CDAS+LLD +     E++
Sbjct:   39 PGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQ 105          

HSP 2 Score: 49.6766 bits (117), Expect = 3.509e-18
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query:  322 FRYIENIKEAVERECPG-VVSCADILVLSGRDGVVALGGPYIPLKTGRRD 468
            F+ I +I + + +EC G VVSC+D+L L+ RD VV  GGP   +  GRRD
Sbjct:  117 FKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRD 166          
The following BLAST results are available for this feature:
BLAST of CK934179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PER1_ARAHY4.243e-1948.48Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER13_ARATH5.517e-1942.11Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PERN1_TOBAC7.168e-1956.90Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER4_ARATH7.176e-1940.24Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER59_ARATH9.323e-1959.62Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER7_ARATH1.211e-1849.21Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER61_ARATH1.575e-1844.59Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER53_ARATH2.049e-1838.89Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER66_MAIZE2.051e-1856.14Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER1_SORBI3.509e-1846.27Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934179 ID=CK934179; Name=CK934179; organism=Citrus sinensis; type=EST; length=540bp
AAATGGGTANTAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCA
GCTGTGTCTCTGAGGTCTGCTTTGGAAGAAAATGAAGAGGACCCAGGTCT
TGTTATGAATTTTTACAAGGATACCTGCCCTCAGGCCGAGGACATTATCA
GGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCT
TGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTC
ACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGCATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGGCAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTT
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