CK934179

Overview
NameCK934179
Unique NameCK934179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 4.497e-18
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 3
Query:   96 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL 260
            GL  NFY+  CP+ E+IIR+++K ++KR    A + LR  FHDC VQ C+AS+LL
Sbjct:   43 GLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLL 97          

HSP 2 Score: 50.8322 bits (120), Expect = 4.497e-18
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 1
Query:  322 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 468
            F  I N++  V+++C  VVSC+DIL L+ RD VV  GGP   +  GRRD
Sbjct:  120 FVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRD 168          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 4.515e-18
Identity = 28/72 (38.89%), Postives = 38/72 (52.78%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            R F  ++NIK A+E  CPGVVSC+DIL L+    V   GGP   +  GRRD   +        +P   + +S
Sbjct:   75 RGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLS 146          

HSP 2 Score: 55.4546 bits (132), Expect = 4.515e-18
Identity = 26/63 (41.27%), Postives = 34/63 (53.97%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            FY  TCP A  I+R  ++  ++       S +R  FHDC V  CDAS+LLD +    SEK  G
Sbjct:    6 FYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAG 68          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.860e-18
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  322 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A
Sbjct:  100 FSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMA 154          

HSP 2 Score: 46.2098 bits (108), Expect = 5.860e-18
Identity = 25/62 (40.32%), Postives = 33/62 (53.23%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL--DSTRKT 278
            L  NFY  +C  AE ++R  V+             LR  FHDC VQ CDAS+L+  +ST K+
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKS 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 7.609e-18
Identity = 24/71 (33.80%), Postives = 41/71 (57.75%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 528
            R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD  +   ++    LP  + ++
Sbjct:   97 RGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTL 167          

HSP 2 Score: 54.6842 bits (130), Expect = 7.609e-18
Identity = 27/62 (43.55%), Postives = 35/62 (56.45%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKD 88          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.623e-18
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            +R F  ++NIK  VE  CPGVVSCADIL ++ RD VVALGGP   +  GRRD   +   +    LP
Sbjct:   99 IRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLP 164          

HSP 2 Score: 44.2838 bits (103), Expect = 7.623e-18
Identity = 23/60 (38.33%), Postives = 30/60 (50.00%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            FY  +CP+A   I+  V     +      S LR  FHDC VQ CD S+LL+ T     E+
Sbjct:   31 FYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQ 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 7.625e-18
Identity = 35/86 (40.70%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  277 PCLRRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSV 534
            P   R+   +  +  F  I++ K  +E  CPGVVSCADIL L+ RD V    G    + TGRRDGR S A  +   LP  +DS+++
Sbjct:   81 PNSERTAGANVNLHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAI 165          

HSP 2 Score: 45.8246 bits (107), Expect = 7.625e-18
Identity = 24/55 (43.64%), Postives = 28/55 (50.91%), Query Frame = 3
Query:   96 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL 260
            G  + FY  TCP AE I+R  V   +      A   LR   HDC VQ CD S+LL
Sbjct:   24 GTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLL 78          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 9.902e-18
Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP
Sbjct:   84 RGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLP 148          

HSP 2 Score: 53.1434 bits (126), Expect = 9.902e-18
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            L   FY ++CP   +I+R+ +    +   + A S LR  FHDC V  CDAS+LLD+T    +EK+
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKD 75          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.289e-17
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 480
            R F  + +IK  VE  CPGVVSCADIL ++ RDGVVALGGP   +  GRRD   S
Sbjct:  102 RAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGS 156          

HSP 2 Score: 45.8246 bits (107), Expect = 1.289e-17
Identity = 23/57 (40.35%), Postives = 28/57 (49.12%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST 269
            L   FY  +CP A   I   V     +      S LR  FHDC +Q CDAS+LL+ T
Sbjct:   31 LSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDT 87          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.672e-17
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP
Sbjct:  120 VRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLP 185          

HSP 2 Score: 47.7506 bits (112), Expect = 1.672e-17
Identity = 27/74 (36.49%), Postives = 36/74 (48.65%), Query Frame = 3
Query:   81 NEEDPGLVMN----FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            N    GL  N    FY  +CP+ + I++  V   +K     A S LR  FHDC V  CD S+LL+ +     EK
Sbjct:   38 NGHGHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEK 111          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.172e-17
Identity = 27/65 (41.54%), Postives = 36/65 (55.38%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            R F  +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG  +        LP
Sbjct:  106 RGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLP 170          

HSP 2 Score: 53.1434 bits (126), Expect = 2.172e-17
Identity = 26/60 (43.33%), Postives = 31/60 (51.67%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            FY  TCP A  I+R  ++   +       S +R  FHDC V  CD SLLLD T    SEK
Sbjct:   37 FYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEK 96          
The following BLAST results are available for this feature:
BLAST of CK934179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PER12_ARATH4.497e-1850.91Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PERA2_ARMRU4.515e-1838.89Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER46_ARATH5.860e-1852.73Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER38_ARATH7.609e-1833.80Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER70_MAIZE7.623e-1850.00Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER62_ARATH7.625e-1840.70Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER1C_ARMRU9.902e-1841.54Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER42_MAIZE1.289e-1758.18Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER10_ARATH1.672e-1743.94Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER54_ARATH2.172e-1741.54Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934179 ID=CK934179; Name=CK934179; organism=Citrus sinensis; type=EST; length=540bp
AAATGGGTANTAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCA
GCTGTGTCTCTGAGGTCTGCTTTGGAAGAAAATGAAGAGGACCCAGGTCT
TGTTATGAATTTTTACAAGGATACCTGCCCTCAGGCCGAGGACATTATCA
GGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCT
TGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTC
ACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGCATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGGCAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTT
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