CK934179

Overview
NameCK934179
Unique NameCK934179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:50..588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.446e-15
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVV 537
            + +   +  +  F  I++IK A+E  CPGVVSCADIL ++    V   GGP + +  GRRDGR +        LP   DS+ ++
Sbjct:   90 KEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEIL 173          

HSP 2 Score: 41.9726 bits (97), Expect = 1.446e-15
Identity = 20/56 (35.71%), Postives = 27/56 (48.21%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS 266
            L  +FY  TCP    I R  ++   +         +R  FHDC V  CD S+LLD+
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDA 80          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.446e-15
Identity = 27/67 (40.30%), Postives = 39/67 (58.21%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHGQEL 308
            NFY  +CP  E I+R  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+H + L
Sbjct:   30 NFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENL 96          

HSP 2 Score: 44.2838 bits (103), Expect = 1.446e-15
Identity = 27/72 (37.50%), Postives = 37/72 (51.39%), Query Frame = 1
Query:  322 FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            F  +   KEA++    C   VSCADIL ++ RD V   GGP   ++ GR DG  S A  +   LP   D ++
Sbjct:  103 FDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVN 174          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.446e-15
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1
Query:  295 MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            ++RS     F  I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M  ++
Sbjct:   89 INRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHII 170          

HSP 2 Score: 49.2914 bits (116), Expect = 1.446e-15
Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            L  ++Y  TCP+ E+ + + V         TA   LR  FHDC V  CDAS+L+ ST +  SE++
Sbjct:   22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERD 86          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.886e-15
Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 1
Query:  322 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE 489
            F  + NIK AVE+ CPGVVSCADIL ++    V   GGP   ++ GRRD R++  +
Sbjct:   72 FNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQ 127          

HSP 2 Score: 43.8986 bits (102), Expect = 1.886e-15
Identity = 20/59 (33.90%), Postives = 30/59 (50.85%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSE 287
            FY ++CP   +I+R  V+      +      +R  FHDC V  CD S+LL+     +SE
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSE 60          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.442e-15
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEH 296
            L  NFY ++CP  E I+++ V+   K+   T  + LR  FHDC V  CDAS+++ ST    +EK+H
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDH 92          

HSP 2 Score: 45.4394 bits (106), Expect = 2.442e-15
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 1
Query:  322 FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            F  +   K+A++    C   VSCADIL L+ RD VVA  GP   ++ GR DG  S A  +   LP  N+ ++
Sbjct:  103 FDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVT 174          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.165e-15
Identity = 27/67 (40.30%), Postives = 37/67 (55.22%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            R ++  +  +R F  I+  K AVE+ CP  VSCADI+  + RD +   G     +  GRRDGR S A
Sbjct:   99 RDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSNA 165          

HSP 2 Score: 47.3654 bits (111), Expect = 3.165e-15
Identity = 21/54 (38.89%), Postives = 31/54 (57.41%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL 260
            L + FY  +CP AE ++R+ V   + +    A   +R  FHDC V+ CD S+LL
Sbjct:   35 LRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLL 88          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.351e-14
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 531
            +R F  IE  K  +E+ CP  VSCADIL L+ RD VV  GG    +  GR DGR S+A   +  LP  +DS++
Sbjct:  105 LRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVA 175          

HSP 2 Score: 38.5058 bits (88), Expect = 3.351e-14
Identity = 20/52 (38.46%), Postives = 26/52 (50.00%), Query Frame = 3
Query:  105 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL 260
            + FY + C   E I+R  V+   +     A   LR  FHDC V  CD S+LL
Sbjct:   39 VGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 3.353e-14
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 1
Query:  310 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            G   F  +++IK A+E  CPGVVSCADIL L+   GVV   GP   +  GR+D   +        +P   ++++V++
Sbjct:   93 GAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMI 169          

HSP 2 Score: 43.5134 bits (101), Expect = 3.353e-14
Identity = 24/65 (36.92%), Postives = 31/65 (47.69%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            L   FY  TCP    I+R  +    +         +R  FHDC V  CD S+LLD T  T +EK+
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLD-TDGTQTEKD 87          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 5.656e-14
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 1
Query:  304 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGG--PYIPLKTGRRDGRKSRAEILE 498
            +  +R +  I++IK AVE+EC  VVSCADI+ L+ RD V    G      + TGR DG+ S A +++
Sbjct:   93 NLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD 159          

HSP 2 Score: 45.4394 bits (106), Expect = 5.656e-14
Identity = 25/70 (35.71%), Postives = 36/70 (51.43%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHGQEL 308
            L + FY   C   E+I+ + V   + +  + A + +R  FHDC    CDASLLLD +    SEK+    L
Sbjct:   28 LRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASPNL 94          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 1
Query:  172 TSATRTLHFLGLETFSMTVLSSLVMLHCFWTRQERPCLRRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            T+A  TL     + F     +S+++    + + ER      ++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGP+  +K GR+DG +S+A  ++  LP  N S+  +L
Sbjct:   55 TTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERD---DDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDML 174          
The following BLAST results are available for this feature:
BLAST of CK934179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PER58_ARATH1.446e-1536.90Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER50_ARATH1.446e-1540.30Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER6_ARATH1.446e-1537.80Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER2_CUCSA1.886e-1548.21Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER73_ARATH2.442e-1540.91Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER1_MAIZE3.165e-1540.30Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER69_ARATH3.351e-1445.21Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PERX_TOBAC3.353e-1436.36Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER60_ARATH5.656e-1441.79Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER41_ARATH8.510e-1134.96Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934179 ID=CK934179; Name=CK934179; organism=Citrus sinensis; type=EST; length=540bp
AAATGGGTANTAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCA
GCTGTGTCTCTGAGGTCTGCTTTGGAAGAAAATGAAGAGGACCCAGGTCT
TGTTATGAATTTTTACAAGGATACCTGCCCTCAGGCCGAGGACATTATCA
GGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCT
TGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTC
ACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGCATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGGCAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTT
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