CK934180

Overview
NameCK934180
Unique NameCK934180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:7..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.400e-51
Identity = 118/202 (58.42%), Postives = 135/202 (66.83%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFY-SGLGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            DP  LQD CVA  D    V VNG  CKD K    +DFF  + L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V EGTLYVGFVTS+Q N  N L  K LNKGDV VFPQGLIHFQFN      A A +AL+SQ PG +TIAN VFG+NP I+ D L KAFQ+D K V  LQ +F
Sbjct:   24 DPSPLQDFCVA--DRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.829e-51
Identity = 113/199 (56.78%), Postives = 133/199 (66.83%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTL+VGFVTS+  NNTL +KVLNKGDV VFP GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ + L KAFQ+    +  LQ +F
Sbjct:   23 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNP-NNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVLAKAFQVGKGTIDWLQAQF 218          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.829e-51
Identity = 118/203 (58.13%), Postives = 136/203 (67.00%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +DP  LQD CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+Q N  N L  K LNKGDV VFPQGLIHFQFN      A A +AL+SQ PG +TIAN VFG+N  I+ D L KAFQ+D K V  LQ +F
Sbjct:   23 SDPSPLQDFCVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.119e-51
Identity = 117/203 (57.64%), Postives = 138/203 (67.98%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGN-TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +DP  LQD+CVA  D    V VNG  CKD K    +DFF +  L KP + T ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V+EG+LYVGFVTS+Q N  N L  K LNKGDV VFP+GLIHFQFN      AAA  AL+SQ PG +TIAN VFG+NP I+ D L KAFQ+D K V  LQ +F
Sbjct:   23 SDPSPLQDLCVA--DKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.321e-51
Identity = 113/199 (56.78%), Postives = 133/199 (66.83%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +DP  LQD CVA  D    V VNG  C +P    A+ FF +         N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDV VFPQGLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ + L KAFQ++   +  LQ +F
Sbjct:   23 SDPSPLQDFCVA--DMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQF 218          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.641e-50
Identity = 111/199 (55.78%), Postives = 132/199 (66.33%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +DP  LQD CVA  D    V VNG  C +PK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  +N   +KVLNKGDV VFP GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ D L KAFQ++   +  LQ +F
Sbjct:   23 SDPSPLQDFCVA--DMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-DNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQF 218          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.449e-50
Identity = 112/217 (51.61%), Postives = 139/217 (64.06%), Query Frame = 3
Query:   75 FLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            FL+G              DP  LQD CVA  D    V VNG  CK+P    +EDFF +     P NT N+LG + T+ NV + PGLNTLGIS  RIDYAP G  PPH HPRA+E+  VLEGTLYVGFVTS+   N L +KV+ KGDV VFP+ +IHFQ N+     A A SAL+SQ PG +TIA+ VFG+ P I+ D L KAFQ++ K++  LQ++F
Sbjct:    7 FLLGALLVLASWQAIVAYDPSPLQDFCVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAFQVEKKLIDWLQSQF 219          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 115/203 (56.65%), Postives = 136/203 (67.00%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +DP  LQD CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EI  VLEG+LYVGFVTS+Q N  N L  K LNKGDV VFPQGLIHFQFN      A A +AL+SQ PG +TIAN VFG++P I+ D L KAFQ+D K +  LQ +F
Sbjct:   23 SDPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAFQVDKKAMDWLQAQF 223          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49
Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            DP  LQD CVA  D K  V VNG  CK+P    ++DFF +     P +T N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPH HPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGD  VFP+ +IHFQ N+     A A S+LNSQ PG +TIA+ VFG+ P I+ D L KAFQ++ K++  L+++F
Sbjct:   25 DPSPLQDFCVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQF 219          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.109e-48
Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            DP  LQD CVA  D    V VNG  CK+P    ++DFF +     P NT N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPH HPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGDV VFP+ +IHFQ N+     A A SAL+SQ PG +TIA+ +FG+ P I+ D L KAFQ++ K++  L+++F
Sbjct:   25 DPSPLQDFCVA--DMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQF 219          
The following BLAST results are available for this feature:
BLAST of CK934180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL121_ORYSJ1.400e-5158.42Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL89_ORYSJ1.829e-5156.78Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL122_ORYSJ1.829e-5158.13Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL123_ORYSJ3.119e-5157.64Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL85_ORYSJ5.321e-5156.78Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL811_ORYSJ2.641e-5055.78Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL812_ORYSJ3.449e-5051.61Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL124_ORYSJ4.504e-5056.65Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL84_ORYSJ4.980e-4952.76Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ1.109e-4852.76Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934180 ID=CK934180; Name=CK934180; organism=Citrus sinensis; type=EST; length=738bp
GGGGAAATCACACCACTTGATTAAGGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGTAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTACTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGCATTGACTATGCACCATATGGCCAAAGGCCACCTCACTTTCACCC
CCGTGCCAGTGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTAGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCAGCTGCTTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCAACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGATCCAAAGATAGTGAA
AGATCTTCAAAATAAGTTCATTAATGGCNNNNAGGAGA
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