CK934180

Overview
NameCK934180
Unique NameCK934180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:7..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.300e-44
Identity = 94/198 (47.47%), Postives = 127/198 (64.14%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +D   LQD CV   D K    +NG  CK      A DFFYSGLG P +T+N  GV    ANV   PGLNTLGIS   ++ AP G  PPH HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+  V P+GL+HFQ+N+G+  A   +A NSQ PG V + +T+FG+ P I    L +AF+ D   V++L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43
Identity = 99/197 (50.25%), Postives = 122/197 (61.93%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            D   LQD+CVA  D    + VNG  CK      AEDFF + L K G T N  G   T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+  VFP+GL+HFQ N G   A   +  NSQ PG V I  T+F A P +  + L KAFQ+  K V+ +++KF
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.394e-43
Identity = 93/198 (46.97%), Postives = 127/198 (64.14%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            +D   LQD CV   D K    +NG  CK      A DFF+SGLG P NT+   GV  + ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++ V P+GL+HFQ+N+GK  A   ++ NSQ PG   + +T+FG+NP+I    L K F+ D   V  L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.966e-43
Identity = 96/204 (47.06%), Postives = 134/204 (65.69%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVF-VNGKFCKDPKLARAEDFFYSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYG-QRPPHFHPRASEIFLVLEGTLYVGFV--TSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFG-ANPSINPDFLGKAFQLDPKIVKDLQNKF 719
            DP  LQD+CVA      G   VNG  CK      AEDFF+ GLGKP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+G   PPH HPRA+EI  V +G L VGFV  T+   ++ LI +V+ KG V VFP+GL+H++ ++G+  A A SA +SQ PG    A+ +FG ++P++  D L +AFQ+D  +V+++++KF
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGVVENIKSKF 232          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.006e-41
Identity = 91/169 (53.85%), Postives = 109/169 (64.50%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFG 635
            DP  LQD+CVA  D   G+ +NG  CKD     + DFF  GL KPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDV  FP+GL+HFQ N G   A+  +A NSQ PG  ++  T+FG
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.926e-41
Identity = 91/201 (45.27%), Postives = 125/201 (62.19%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 728
            TDP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+  + P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.477e-40
Identity = 90/201 (44.78%), Postives = 122/201 (60.70%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 728
            ++P  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+  + P+GL+HFQFN+GKT A+     NSQ P  V +  T+FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGG 223          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.519e-40
Identity = 90/201 (44.78%), Postives = 124/201 (61.69%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 728
            +DP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+  + P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.414e-40
Identity = 90/201 (44.78%), Postives = 123/201 (61.19%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 728
            +DP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+  V P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG++P I    L KA +++  +V+ L++KF  G
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGG 200          
BLAST of CK934180 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.097e-39
Identity = 90/202 (44.55%), Postives = 122/202 (60.40%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVLVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 728
            TD   LQD CVA  D K  V VNG  CK    A  E  F S +   G+  AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH HPRA+E+ +VL G L VG + +  + N   +KV+  G+  V P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTGG 228          
The following BLAST results are available for this feature:
BLAST of CK934180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLT1_ARATH6.300e-4447.47Germin-like protein subfamily T member 1 OS=Arabid... [more]
RHRE_PEA1.404e-4350.25Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GLT2_ARATH2.394e-4346.97Germin-like protein subfamily T member 2 OS=Arabid... [more]
GL14_ORYSJ6.966e-4347.06Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL21_ARATH1.006e-4153.85Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GER2_WHEAT2.926e-4145.27Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GER3_WHEAT2.477e-4044.78Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU5.519e-4044.78Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU9.414e-4044.78Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL34_ORYSJ2.097e-3944.55Putative germin-like protein 3-4 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934180 ID=CK934180; Name=CK934180; organism=Citrus sinensis; type=EST; length=738bp
GGGGAAATCACACCACTTGATTAAGGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGTAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTACTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGCATTGACTATGCACCATATGGCCAAAGGCCACCTCACTTTCACCC
CCGTGCCAGTGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTAGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCAGCTGCTTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCAACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGATCCAAAGATAGTGAA
AGATCTTCAAAATAAGTTCATTAATGGCNNNNAGGAGA
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