CK934191

Overview
NameCK934191
Unique NameCK934191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK934191 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.060e-11
Identity = 39/128 (30.47%), Postives = 70/128 (54.69%), Query Frame = 3 
Query:   12 QVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEG-VPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLP 386
            Q++ QYY  +R G  GY  V + C ++ + + + ++K G F+IV    G +P   + LK +   + + F++++ +R  GW + +YT+P +   I V RV+IR  FS  +A  L+ D  + +   D  P
Sbjct:  321 QIVCQYYNFLRHGRSGYTAVHQACLDHGIFISKQVKKHGIFDIVYDGTGALPGACWKLKKDAKVKFNLFDLSDRMRNRGWQIASYTLP-NLPDIVVQRVLIRHGFSHDMAMLLIEDFNRSIEYFDKHP 447
The following BLAST results are available for this feature:
BLAST of CK934191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GADA_DICDI5.060e-1130.47Glutamate decarboxylase A OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_B11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934191 ID=CK934191; Name=CK934191; organism=Citrus sinensis; type=EST; length=545bp
AAGGTTCTAGCCAAGTAATTGCTCAGTACTACCAACTAATCCGCTTAGGT
TTTGAGGGATACCGCAATGTGATGGAGAATTGTCACGAAAATGCAATGGT
GCTGAAAGAAGGACTAGAGAAAACCGGCCGCTTCAACATTGTGTCAAAGG
ACGAAGGGGTTCCGTTGGTGGCATTTTCTCTCAAGGACAACAAACGCCAC
GATGAATTCGAAGTGGCCGAATTGCTGCGCCGTTTTGGTTGGATTGTGCC
AGCGTACACCATGCCCGCTGACGCTCAGCACATCACCGTGTTACGTGTCG
TCATCAGGGAAGACTTCTCTCGCACACTTGCCGAGCGCCTTGTGCTCGAC
ATCACAAAAGTGCTTCATGAGCTTGATTCGCTTCCTTCAAAAGTGCTTGT
ACCTGCTTCTGAACAGAATGGAAGGAATGGAAAGAAGACTGAAATTGAGA
CTCAGAGGGAAGTCACTACTTACTGGAGGAAATTCGTCTCNNNNNNGAAA
GCTAATAACAAGAATAAAATTTGTTAAGACACACCCCCCCCCCCC
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