CK934194

Overview
NameCK934194
Unique NameCK934194
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:72..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 1.956e-65
Identity = 129/222 (58.11%), Postives = 157/222 (70.72%), Query Frame = 2
Query:  128 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRV 793
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K       G +  D   RF+  GKPI+HF+GTSTFSQYTVV + +VAKID  +PL+KVCL+GCG  TG G+  N AKV PGS  AVFGLG VGL+   GCKAAGA+R+
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ-DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARI 220          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.554e-65
Identity = 122/223 (54.71%), Postives = 163/223 (73.09%), Query Frame = 2
Query:  131 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            +T G+VI CKAAV W P + L IE+++VAPP+  EVR+KI+ T +C +D +  SG   +  FP ILGHEAAG+VESVGEGVT+ +PGD VIP +  +C EC+ CK+ ++NLC K       GV++ D+ SRF+  GK I++F+ TSTF++YTV+ +++VAKI   APL+KVCL+GCG  TG G+  NT KV+PGS  AVFGLG VGL+V  GCK AGASR+ G
Sbjct:    1 ATAGKVIKCKAAVCWGPKQPLSIEEIEVAPPKRHEVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKVIPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLL-DKTSRFTCKGKSIHNFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIG 222          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.554e-65
Identity = 125/223 (56.05%), Postives = 156/223 (69.96%), Query Frame = 2
Query:  131 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            ST G+VI CKAAV WEP K   I +++VAPP+A EVRIKIL + +C +D +  SG      FP ILGHEAAG+VESVGEGVT ++PGD VIP +  +C EC  C+  + N+C K       G++  D  SRF+  GKP+YHF+ T TF++YTV  + SV KID  APL+KVCL+GCG  TG GA  N+AKV+PGS  AVFGLG VGL+   GCKAAGASR+ G
Sbjct:    1 STAGKVIKCKAAVVWEPKKPFSIVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALKVN-FPIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLY-DGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIG 221          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.554e-65
Identity = 129/222 (58.11%), Postives = 157/222 (70.72%), Query Frame = 2
Query:  128 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRV 793
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K       G +  D   RF+  GKPI+HF+GTSTFSQYTVV + +VAKID  +PL+KVCL+GCG  TG G+  N AKV PGS  AVFGLG VGL+   GCKAAGA+R+
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ-DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARI 220          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 3.336e-65
Identity = 129/224 (57.59%), Postives = 157/224 (70.09%), Query Frame = 2
Query:  128 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            M T G+VI CKAAV W  N+   IED++VAPP+A EVR+KIL T +C TD +   G      FP I+GHEA GIVESVGE VT VRPGD VIP +  +CREC  C++ + NLC +    TG GV+  D  +RF+  GKP+ HFM TSTF++YTV+ + SVAKID +AP +K CL+GCG  TG GA   TAKV PGS  AVFGLG VGL+V  GCKAAGASR+ G
Sbjct:    1 MDTAGKVIKCKAAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKGT-MVSKFPVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLCIR-SDLTGRGVLA-DGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIG 221          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 247.669 bits (631), Expect = 5.690e-65
Identity = 128/224 (57.14%), Postives = 157/224 (70.09%), Query Frame = 2
Query:  128 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            M T G+ ITCKAAVAWEP+K L +E + VAPP+A EVRIKIL + +C +D+       P   FP ILGHEA G+VES+G GVT V+PGD VIP +  +C  C+ CKS  +N C K       G+M  D  SRF+  GKPIY+ +GTSTF++YTVV D++VAKIDP+APL+  CL+GCG  TG GA  NTAKV PGS  AVFGLG VG +   GCKAAGASR+ G
Sbjct:    1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA-DMTSRFTCRGKPIYNLVGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIG 221          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.431e-65
Identity = 121/215 (56.28%), Postives = 153/215 (71.16%), Query Frame = 2
Query:  158 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            +AAVA E  K L + +V +  P+AGEV ++I  T +CHTD +T SG DPEGLFP ILGHE AG+V  VG GVT V+PG+HVIP Y  ECR+C  C SGKTNLC  +R   G G +M D  SRFS ++G PI+H+MG STFS YTV+ +++VAK+   AP DK+C +GCGV TG+GAV NTAKVE G+   VFGLG +GL V +G + AGA  + G
Sbjct:    4 RAAVALEAGKPLEVMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGLFPSILGHEGAGVVVEVGPGVTSVKPGNHVIPLYTPECRQCASCLSGKTNLCTAIRATQGQG-LMPDGTSRFSMLDGTPIFHYMGCSTFSNYTVLPEIAVAKVREDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVLQGLRLAGADMIIG 217          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 9.706e-65
Identity = 126/224 (56.25%), Postives = 156/224 (69.64%), Query Frame = 2
Query:  128 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            M T G+VI CKAAV WE  +   IE+++VAPP+  EVRIKIL T +C TD +   G      FP I+GHEA GIVES+GEGVT V+PGD VIP +  +CREC  C++   NLC +    TG GV+  D  +RF+  GKP++HFM TSTF++YTVV + SVAKID  AP +KVCL+GCG  TG GA   T KV+PGS   VFGLG VGL+V  GCK+AGASR+ G
Sbjct:    1 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIR-SDITGRGVLA-DGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIG 221          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.656e-64
Identity = 127/224 (56.70%), Postives = 157/224 (70.09%), Query Frame = 2
Query:  131 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA-GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            ST G+VI CKAA+ WE  K   IE+++VAPP+A EVRIKIL T +C +D +  +G     L P ILGHEAAG+VES GEGVT ++PGD VIP +  +C EC  C     NLC  +R   G+   +M D  SRF+  GK I+HF+GTSTF++YTVVH+ +VA+ID  APL+KVCL+GCG  TG GA    AKVEPGS  AVFGLG VGL+   GCKAAGASR+ G
Sbjct:    1 STAGKVIKCKAAITWEIKKPFSIEEIEVAPPKAHEVRIKILATGICRSDDHVTAGLLTMPL-PMILGHEAAGVVESTGEGVTSLKPGDKVIPLFVPQCGECMPCLKSNGNLC--IRNDLGSPSGLMADGTSRFTCKGKDIHHFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVFGLGGVGLSTIMGCKAAGASRIIG 221          
BLAST of CK934194 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 246.128 bits (627), Expect = 1.656e-64
Identity = 128/224 (57.14%), Postives = 157/224 (70.09%), Query Frame = 2
Query:  128 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVRPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGCKAAGASRVXG 799
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++   +C +D +  SG     L P I GHEAAGIVES+GEGVT VRPGD VIP +  +C +C  CK  + NLC  ++  +     M D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  TG G+    AKV  GS  AVFGLG VGL+V  GCKAAGA+R+ G
Sbjct:    1 MSTAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIG 221          
The following BLAST results are available for this feature:
BLAST of CK934194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
ADH1B_PANTR1.956e-6558.11Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1_RANPE2.554e-6554.71Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1B_UROHA2.554e-6556.05Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH1B_HUMAN2.554e-6558.11Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH7_RAT3.336e-6557.59Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADH8_RANPE5.690e-6557.14NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
FADH_PARDE7.431e-6556.28S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADH7_HUMAN9.706e-6556.25Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH1_ALLMI1.656e-6456.70Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH1S_HORSE1.656e-6457.14Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934194 ID=CK934194; Name=CK934194; organism=Citrus sinensis; type=EST; length=800bp
GGGGACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGTCCCTTTT
GAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGTCTGTTTT
TCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTCAAGTCAT
CACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTGGTGATTG
AGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAATCAAGATT
CTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCGGCAAGGA
TCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCTGGGATTG
TGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCGACCAGGTGATCATGTC
ATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCTGG
AAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCTGGTGTCA
TGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCCTATCTAT
CACTTCATGGGAACCTCAACATTTAGCCAGTACACAGTTGTGCATGATGT
TAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGTATGCCTTC
TTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACACTGCAAAA
GTGGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACTGTTGGCCT
TGCTGTGGCAGAGGGGTGCAAGGCAGCTGGAGCTTCACGTGTTANTGGTA
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