CK934199

Overview
NameCK934199
Unique NameCK934199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10938 contig Csv1_Contig10938:31..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC6_ARATH (Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 51/157 (32.48%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRK-TLDAG 683
            ++ F+V  I  + L    +++ +N KFPGP I             N    +  IHW GI+Q+RS W DG    T CPI    ++TY F+V  Q G+F +     + RA+  +G  I+  +A +P PF  P  + TIL+G+++ +N   L +  L++G
Sbjct:   33 FYQFKVQTIRLTRLCQTNEIVTVNKKFPGPAISAQEDDRIVIKVINMTPYNTTIHWHGIKQKRSCWYDGPSYITQCPIQSGQSFTYNFKVAQQKGTFLWHAHFSWLRAT-VYGPLIVYPKASVPYPFKKPFNEHTILLGEYWLKNVVELEQHVLESG 188          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  222 FDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT-LDAGEGLGMPD 704
            F F V +   + L   +Q++ +NG++PGPT+             N++  +  IHW G++Q R+ W DG    T CPI  K ++TY+F+V+DQ G+  +     +QRAS  +G FII  R   P        +I I++G+W+  +   + K  +  G G  + D
Sbjct:   31 FHFNVEWKKVTRLCHTKQLLTVNGQYPGPTVAVHEGDIVEIKVTNRIAHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQRAS-VYGAFIIYPRQPYPFSGSHIQSEIPIILGEWWNDDVDNVEKAMMKTGAGAKVSD 192          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC9_ORYSJ (Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 47/160 (29.38%), Postives = 83/160 (51.88%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGEGLG 695
            ++DF ++    + L   + ++ +NG+FPGPTI             N  ++++ IHW G+ Q R+ W DG    T CPI P  N+TYQ  + ++ G+ ++     F RA+   G  +I+ +     PF  PD +I +++G+W+  +   +   LD  + LG
Sbjct:   32 HYDFFITETNYTRLCHEKSILTVNGQFPGPTIYARKGDLVIVNVHNNGNKNITIHWHGVDQPRNPWSDGPEFITQCPIRPGGNFTYQVILSEEEGTLWWHAHSDFDRAT-VHGAIVIHPKRGTTFPFKKPDKEIPVILGEWWNDD---IEHVLDKAQLLG 187          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSJ (Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 53/153 (34.64%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  228 FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDGL-LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 683
            F V  +  + L    ++  +NG+ PGPT+             NK+   L IHW G++Q RS W DG    T CPIPP    TY+F V DQVG+ ++   +   R++   G FII  R     PF TP  D+ I+IG+W+  +   L + +  G
Sbjct:   30 FVVHEMNVTHLCNTTKIFVVNGQLPGPTVDVTEGDTVVIHVVNKIPHGLTIHWHGVRQLRSCWADGAGFITECPIPPGSERTYRFNVTDQVGTLWWHAHVTCLRSTIN-GAFIIRPRD-GKYPFPTPVKDVPIIIGEWWELDLVELDRRMRDG 180          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSI (Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 53/153 (34.64%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  228 FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDGL-LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 683
            F V  +  + L    ++  +NG+ PGPT+             NK+   L IHW G++Q RS W DG    T CPIPP    TY+F V DQVG+ ++   +   R++   G FII  R     PF TP  D+ I+IG+W+  +   L + +  G
Sbjct:   30 FVVHEMNVTHLCNTTKIFVVNGQLPGPTVDVTEGDTVVVHVVNKIPHGLTIHWHGVRQLRSCWADGAGFITECPIPPGSERTYRFNVTDQVGTLWWHAHVTCLRSTIN-GAFIIRPRD-GKYPFPTPVKDVPIIIGEWWELDLVELDRRMRDG 180          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC24_ORYSJ (Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 3
Query:  216 VYFDFEVSYITASPLGVPQQVI-AINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR-AIIPIPFDTPDGDITILIGDWYTRN 650
            V + F V  ++ S L   + +I A+NG+ PGPTI             N+   ++ IHW GI QR + W DG  + T CP+ P  N+TY+F V  Q G+ ++     F RA+  +G  II  R      PF  PD ++ +++G+W+  N
Sbjct:   26 VEYTFNVGNLSISQLCQQEMIITAVNGQLPGPTIVATEGDTVVVHMVNESPYNMTIHWHGIFQRGTPWADGPAMVTQCPVRPGGNYTYRFNVTGQEGTLWWHSHFSFLRAT-VYGALIIKPRGGAKAYPFPVPDEEVVVILGEWWKTN 172          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKL-DESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWY 641
            ++ ++V Y+  SP  V   V+ ING+FPGPTI             NKL  E ++IHW GI QR + W DG    + C I P   +TY+F V D+ G++FY   L  QR++G +G  I++       PF   D +I +L+ DW+
Sbjct:   40 HYKWDVEYMFWSPDCVENIVMGINGEFPGPTIRANAGDIVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFTYRF-VVDKAGTYFYHGHLGMQRSAGLYGSLIVDPPEGRSEPFHY-DEEINLLLSDWW 180          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 52/143 (36.36%), Postives = 76/143 (53.15%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKL-DESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWY 641
            +F ++V YI  SP G    V+ ING+FPGPTI             NKL  E ++IHW GI+Q  + W DG    + C I P   + Y+F+V D+ G++FY      QR++G +G  I+        PF   DG+  +L+ DW+
Sbjct:   32 HFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWHGIRQIGTPWADGTAAISQCAINPGETFLYRFKV-DKAGTYFYHGHYGMQRSAGLYGSLIVEVGEGEKEPFHY-DGEFNLLLSDWW 172          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 50/144 (34.72%), Postives = 72/144 (50.00%), Query Frame = 3
Query:  222 FDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRN 650
            + F V  +  S L     +IA+NG  PGP I             N    +L IHW GI Q  + W DG  + T CPI P  ++TY+F V  Q G+ ++     F RA+  +G  II  R     PF  PD ++ I++G+W++RN
Sbjct:   33 YTFTVESMRVSRLCNSTDIIAVNGLLPGPMIEVNEGDAVAVEVINGSPYNLTIHWHGILQLLTPWADGPSMVTQCPIQPNSSYTYRFNVTGQEGTLWWHAHSSFLRATV-YGALIIRPRNGSAYPFPAPDQEVPIVLGEWWSRN 175          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 48/160 (30.00%), Postives = 78/160 (48.75%), Query Frame = 3
Query:  222 FDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGEGLGM 698
            + F++     S L   + ++ +NG +PGPTI             N +  ++ IHW G++QRR+ W DG    T CPI    ++ Y F V  Q G+ ++   + + RA+   G  +I   A +P PF  PD +  I++G+W+   H  +      G  LGM
Sbjct:   31 YQFDIVMSNVSRLCHEKAMVTVNGSYPGPTIYAREGDRVIVNVTNHVKHNMTIHWHGLKQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMRAT-VHGAIVILPAAGVPYPFPKPDDEAEIVLGEWW---HADVETVERQGSMLGM 186          
The following BLAST results are available for this feature:
BLAST of CK934199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
LAC6_ARATH7.341e-1832.48Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=... [more]
LAC1_ARATH9.587e-1831.29Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC9_ORYSJ1.635e-1729.38Putative laccase-9 OS=Oryza sativa subsp. japonica... [more]
LAC20_ORYSJ2.136e-1734.64Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC20_ORYSI2.136e-1734.64Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 ... [more]
LAC24_ORYSJ2.789e-1733.78Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
ASO_CUCSA3.643e-1737.06L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_TOBAC4.758e-1736.36L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
LAC7_ORYSJ8.116e-1734.72Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC2_ORYSJ8.116e-1730.00Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934199 ID=CK934199; Name=CK934199; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTCTTTTTTTTTGGGCGGGGGGGGTTTGATAATGTAA
TACCCAGGTAAAAAGCTGAAGGAATTTTTGCTCTAAATTTGTTCAAAAGA
CGCCCAAAGTTGGAAAAAGAAAAAGATTCACAAAATGGCTTTGTGTAGAG
GCTTATCTTTGTTGGCTATCCACATTGCCTTGCTCGCGAGCTTGTGTTCT
GCTGCAGATCTGTTTGTTTACTTCGACTTTGAGGTTTCTTATATCACTGC
TTCTCCTCTTGGTGTGCCCCAGCAGGTTATTGCTATTAACGGCAAGTTTC
CAGGTCCGACTATAAATGTGACTACTAACAACAATGTCGTTGTCAATGTG
AGAAACAAATTAGACGAAAGTCTACTTATCCACTGGTCTGGCATTCAACA
AAGGCGTAGCTCATGGCAAGATGGACTTTTGGGCACCAATTGTCCCATTC
CTCCAAAGTGGAACTGGACTTACCAGTTTCAGGTTAAGGACCAAGTTGGA
AGTTTCTTTTACTTCCCATCCCTCCATTTTCAGAGAGCATCGGGCGGTTT
CGGTGGCTTTATAATTAACAACCGAGCTATTATTCCAATTCCTTTTGATA
CCCCAGATGGGGATATTACAATTTTGATTGGCGATTGGTACACGAGGAAC
CACACGGCTCTGAGAAAGACACTTGATGCTGGGGAAGGTCTAGGAATGCC
AGATGGGGTGCTAATCAA
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