CK934199

Overview
NameCK934199
Unique NameCK934199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10938 contig Csv1_Contig10938:31..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 45/161 (27.95%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  228 FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA-LRKTLDAGEGLGMPD 704
            F+V   + + L   + ++ +NG++PGPT+             N    ++ IHW GI+Q  S W DG    T CPI P  ++ Y+F +  Q G+ ++   + + RA+   G  +I   A +  PF  P  ++ I+ G+W+  +  A + + L  G G  + D
Sbjct:   34 FDVQTTSVTRLCSTKSIVTVNGQYPGPTLFAREGDHVEVTVVNHSPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSYVYRFTITGQRGTLWWHAHISWLRAT-VHGPMVILPPAGVGYPFPAPHEEVPIMFGEWWNNDTEAVISQALQTGGGPNISD 193          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 45/155 (29.03%), Postives = 77/155 (49.68%), Query Frame = 3
Query:  246 TASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA-LRKTLDAGEGLGMPD 704
            T + L V + V  +NG+FPGP +             N ++ ++  HW GI+Q RS W DG    T CPI    ++ Y+F V  Q G+ ++     + RA+  +G  +I     +  PF  P  ++ +L+G+W+  +  A +++ L  G G  + D
Sbjct:    3 TVTRLCVTKSVPTVNGQFPGPKLVVREGDTLVIRVTNNINNNVTFHWHGIRQVRSGWADGPAYITQCPIRSGGSYVYRFTVTGQRGTLWWHAHFSWLRAT-LYGPLVILPPRGVAYPFPKPHREVPLLLGEWFNADPEAVIKQALQTGGGPNVSD 156          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 42/142 (29.58%), Postives = 70/142 (49.30%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWY 641
            + +F V       L     VI +NG+ PGPT+             N    ++ IHW GI+Q R+ W DG    T CPI P  ++ Y+F ++ Q G+ ++     + RA+  +G  II  R     PF+ P  ++ +++G+W+
Sbjct:   28 HHEFIVQETPVKRLCKTHNVITVNGQLPGPTLEVREGDTVVINVVNHAQYNVTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGTLWWHAHSSWLRAT-VYGALIIRPRENKTYPFEKPAREVPLILGEWW 168          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC11_ARATH (Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 45/163 (27.61%), Postives = 78/163 (47.85%), Query Frame = 3
Query:  222 FDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRN-HTALRKTLDAGEGLGMPD 704
            + F+V     S +   + ++ +NG FPGPT+             N +  ++ IHW G++Q R+ W DG    T CPI    ++ Y F V  Q G+ ++   + + RA+  +G  +I      P PF  P  +  I++G+W+ ++  TA+ +    G    M D
Sbjct:   28 YQFDVQVKNISRICNAKPIVTVNGMFPGPTVYAREGDRVIINVTNHVQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGQSYLYDFNVTGQRGTLWWHAHILWLRAT-VYGAIVILPAPGKPYPFPQPYQESNIILGEWWNKDVETAVNQANQLGAPPPMSD 189          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 3
Query:  243 ITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDGL-LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWY 641
            +   PL   Q + A NG  PGPTI             N    ++ IHW G+ Q +S W DG  + T CPI P +N+TYQF +  Q G+  +   +   RA+   G  +I  R+  P PF  P  ++ I+   W+
Sbjct:   37 VVVKPLCKEQIIPAANGSLPGPTINVREGDTLVVNVINNSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPGYNFTYQFDITGQEGTLLWHAHVVNLRAT-LHGALVIRPRSGRPYPFPKPYKEVPIVFQQWW 169          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC5_ARATH (Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 3
Query:  279 IAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT-ALRKTLDAG 683
            I +NG FPGP +             N+   ++ IHW G++Q R+ W DG    T CPI P  ++TY+F ++ Q G+ ++     + RA+  +G  ++   A    PF  P  ++ +L+G+W+  N    LR+++  G
Sbjct:   50 ITVNGMFPGPMLVVNNGDTLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTLWWHAHSSWLRAT-VYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRTG 185          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_PHLRA (Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 50/154 (32.47%), Postives = 69/154 (44.81%), Query Frame = 3
Query:  225 DFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLL-----IHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPI-PFDTPDGDITILIGDWYTRNHTALR 665
            DF +     SP G  +Q +   G FPGP I             ++L  + +     IHW G  Q  ++W DG    N CPI    ++ Y FQV DQ G+F+Y   L  Q   G  G F++ + A   +  +D  D    I + DWY   HTA R
Sbjct:   28 DFHIVNAAVSPDGFSRQAVLAEGVFPGPLIAGNKGDNFQINVIDELTNATMLKTTTIHWHGFFQHGTNWADGPAFINQCPIASGDSFLYNFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPADPYLDQYDVDDDSTVITLADWY---HTAAR 178          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC3_THACU (Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 54/179 (30.17%), Postives = 82/179 (45.81%), Query Frame = 3
Query:  216 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDE-----SLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII-----NNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGE-GLGMPDGVLI 716
            V ++ ++S    +P GV +    +NG +PGP I            +NKL       +  IHW G+ Q R++  DG    T CPI P+ ++TY   + DQ G+++Y   L  Q   G  G  +I      +R +    +D  D    ++IGDWY   HT+ +  L  G   L  PD   I
Sbjct:   22 VEYNLKISNGKIAPDGVERDATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPDMYRTTSIHWHGLLQHRNADDDGPAFVTQCPIVPQASYTYTMPLGDQTGTYWYHSHLSSQYVDGLRGPLVIYDPKDPHRRL----YDIDDEKTVLIIGDWY---HTSSKAILATGNITLQQPDSATI 193          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDT-PDGDIT-ILIGDWYTRN 650
            Y +F +   T   L     ++ +NG+FPGPT+             N+   ++ +HW G++Q R+ W DG    T CP+ P  ++ Y+F V  Q G+ ++     + RA+  +G  +I  R     PFD  P  ++  IL+G+W+  N
Sbjct:   26 YHEFVIRETTVKRLCKSHNIMTVNGQFPGPTLEINEGDSLIINLINRGRYNMTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRAT-VYGALLIRPRDGTSYPFDVQPTRELAPILLGEWWDMN 171          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 39/123 (31.71%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  276 VIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWY 641
            ++ +NG+FPGPTI             N +  ++ IHW GI+Q R+ W DG    T CPI P  N+ + F +  Q G+ ++   + + RA+   G  +I  +  +P PF  P  + TI++ +W+
Sbjct:   49 IVTVNGQFPGPTIVAREGDTILIKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHNFTLTGQRGTLWWHAHILWLRAT-VHGAIVILPKLGVPYPFPKPYKEKTIVLSEWW 170          
The following BLAST results are available for this feature:
BLAST of CK934199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
LAC12_ORYSJ2.210e-1427.95Laccase-12/13 OS=Oryza sativa subsp. japonica GN=L... [more]
LAC11_ORYSJ2.210e-1429.03Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]
LAC3_ORYSJ4.924e-1429.58Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 ... [more]
LAC11_ARATH4.924e-1427.61Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 S... [more]
LAC8_ARATH6.431e-1432.84Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]
LAC5_ARATH1.097e-1329.93Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=... [more]
LAC1_PHLRA1.871e-1332.47Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2[more]
LAC3_THACU2.444e-1330.17Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 ... [more]
LAC17_ORYSJ2.444e-1329.25Putative laccase-17 OS=Oryza sativa subsp. japonic... [more]
LAC16_ARATH2.444e-1331.71Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934199 ID=CK934199; Name=CK934199; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTCTTTTTTTTTGGGCGGGGGGGGTTTGATAATGTAA
TACCCAGGTAAAAAGCTGAAGGAATTTTTGCTCTAAATTTGTTCAAAAGA
CGCCCAAAGTTGGAAAAAGAAAAAGATTCACAAAATGGCTTTGTGTAGAG
GCTTATCTTTGTTGGCTATCCACATTGCCTTGCTCGCGAGCTTGTGTTCT
GCTGCAGATCTGTTTGTTTACTTCGACTTTGAGGTTTCTTATATCACTGC
TTCTCCTCTTGGTGTGCCCCAGCAGGTTATTGCTATTAACGGCAAGTTTC
CAGGTCCGACTATAAATGTGACTACTAACAACAATGTCGTTGTCAATGTG
AGAAACAAATTAGACGAAAGTCTACTTATCCACTGGTCTGGCATTCAACA
AAGGCGTAGCTCATGGCAAGATGGACTTTTGGGCACCAATTGTCCCATTC
CTCCAAAGTGGAACTGGACTTACCAGTTTCAGGTTAAGGACCAAGTTGGA
AGTTTCTTTTACTTCCCATCCCTCCATTTTCAGAGAGCATCGGGCGGTTT
CGGTGGCTTTATAATTAACAACCGAGCTATTATTCCAATTCCTTTTGATA
CCCCAGATGGGGATATTACAATTTTGATTGGCGATTGGTACACGAGGAAC
CACACGGCTCTGAGAAAGACACTTGATGCTGGGGAAGGTCTAGGAATGCC
AGATGGGGTGCTAATCAA
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