CK934199

Overview
NameCK934199
Unique NameCK934199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10938 contig Csv1_Contig10938:31..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC15_ORYSJ (Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 47/154 (30.52%), Postives = 72/154 (46.75%), Query Frame = 3
Query:  228 FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDGL-LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR-AIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 683
            F VS +  + L        +NG+ PGPTI             NK   +L IHW G+ Q  + W DG+ + T  PI P  N+TY+F V  Q G+ ++     F R +   G  II  R      PF  P  ++ I+IG+W+ ++   + + +  G
Sbjct:   45 FVVSQVNMTHLCKEMAFTVVNGQLPGPTIEVTEGDSVTVHVVNKSPYNLTIHWHGVYQLLNCWNDGVPMITQRPIQPNHNFTYRFNVAGQEGTLWWHAHDAFLRGT-VHGALIIRPRHGAASYPFPRPHREVPIIIGEWWEKDLPQVDRNMTNG 197          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC8_ORYSJ (Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 47/143 (32.87%), Postives = 66/143 (46.15%), Query Frame = 3
Query:  228 FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR-AIIPIPFDTPDGDITILIGDWYTRN 650
            F+V     + L +   +   N + PGPTI             N     L +HW G+ Q RS W DG    T CPI P  N+TY+F +  Q G+ ++       RA+  +G  II  R      PF  P  +I IL+G+W+ RN
Sbjct:   28 FKVGGTKITQLCMNSVIYTANQQLPGPTIEVTEGDTLVVHAVNDSPYPLSLHWHGVYQLRSGWNDGANKITQCPIQPSGNFTYRFNITGQEGTLWWHAHSSLLRAT-IYGALIIKPRNGPSGYPFPEPYEEIPILLGEWWNRN 169          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13
Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDT-PDGDIT-ILIGDWYTRN 650
            Y +F +   T   L   Q ++ +NG+FPGPT+             N+   ++ +HW G++Q R+ W DG    T CP+ P  ++ Y+F V  Q G+ ++     + RA+  +G  +I  R     PF   P  ++  IL+G+W+  N
Sbjct:   26 YHEFVIRETTVKRLCKSQSIMTVNGQFPGPTLEIKEGDSLIINLINRGRYNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRAT-VYGALLIRPRDGTSYPFHVQPTRELAPILLGEWWDMN 171          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC14_ARATH (Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 35/128 (27.34%), Postives = 67/128 (52.34%), Query Frame = 3
Query:  273 QVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNH 653
            +++ +NG+FPGPT+             N  + ++ +HW G +Q R+ W DG    T CPI P  ++ Y+  +K + G+ ++     + RA+   G FI+  +     PF  P  +I +++G+W+ + +
Sbjct:   55 KILTVNGEFPGPTLKAYRGDKLIVNVINNANYNITLHWHGARQIRNPWSDGPEYVTQCPIRPGESYVYRIDLKVEEGTIWWHAHSQWARAT-VHGAFIVYPKRGSSYPFPKPHREIPLILGEWWKKEN 181          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_THACU (Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 47/160 (29.38%), Postives = 74/160 (46.25%), Query Frame = 3
Query:  216 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLL-----IHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII-----NNRAIIPIPFDTPDGDITILIGDWYTRNHTAL 662
            V +  ++S    +P GV +    +NG +PGP I            +NKL    +     IHW G+ Q R++  DG    T CPI P+ ++TY   + DQ G+++Y   L  Q   G  G  +I      +R +    +D  D    ++IGDWY  +  A+
Sbjct:   22 VEYGLKISDGEIAPDGVKRNATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPEMYRTTSIHWHGLLQHRNADDDGPSFVTQCPIVPRESYTYTIPLDDQTGTYWYHSHLSSQYVDGLRGPLVIYDPKDPHRRL----YDVDDEKTVLIIGDWYHESSKAI 177          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_TRAHI (Laccase OS=Trametes hirsuta PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 48/157 (30.57%), Postives = 70/157 (44.59%), Query Frame = 3
Query:  225 DFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLD-----ESLLIHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII----NNRAIIPIPFDTPDGDITILIGDWYTRNHTALR 665
            D  +S    SP G  +Q + +N   PGP +             + L      +S  IHW G  Q+ ++W DG    N CPI    ++ Y FQV DQ G+F+Y   L  Q   G  G F++    +  A +   +D  + D  I + DWY   HTA +
Sbjct:   28 DLTISNAEVSPDGFARQAVVVNNVTPGPLVAGNKGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFVNQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASL---YDVDNDDTVITLADWY---HTAAK 178          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_TRAVI (Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 47/148 (31.76%), Postives = 67/148 (45.27%), Query Frame = 3
Query:  225 DFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLD-----ESLLIHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII---NNRAIIPIPFDTPDGDITILIGDWY 641
            D  ++    SP G  +Q + +NG  PGP I             + L      +S  IHW G  Q+ ++W DG    N CPI    ++ Y FQV DQ G+F+Y   L  Q   G  G F++   N+ A     +D  + D  I + DWY
Sbjct:   28 DLTITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMVKSTSIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPA--ADLYDVDNDDTVITLVDWY 173          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_ORYSJ (Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 542
            ++DF ++    + L   + ++ +NG+FPGPTI             N  ++++ IHW G+ Q R+ W DG    T CPI P  N+TYQ  + ++ G+ ++     F RA+
Sbjct:   33 HYDFFITETNYTRLCHEKSILTVNGQFPGPTIYARKGDFIIVNVHNNGNKNITIHWHGVDQPRNPWSDGPEFITQCPIRPGGNFTYQVILFEEEGTLWWHAHSDFDRAT 141          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVI (Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 55/177 (31.07%), Postives = 74/177 (41.81%), Query Frame = 3
Query:  225 DFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLD-----ESLLIHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII-----NNRAIIPIPFDTPDGDITILIGDWYTRNHTA--LRKTLDAGEGLGMPDGVLI 716
            D  +S    +P G+ +  +   G FPGP I             + L      +S  IHW GI Q  ++W DG    N CPI    ++ Y F V DQ G+F+Y   L  Q   G  G  ++      N ++    +D  D    I + DWY   HTA  L     AG     PD VLI
Sbjct:   30 DLTISNADVTPDGITRAAVLAGGVFPGPLITGNKGDEFQINVIDNLTNETMLKSTTIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDDPNASL----YDVDDDTTVITLADWY---HTAAKLGPAFPAG-----PDSVLI 194          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVE (Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 55/177 (31.07%), Postives = 74/177 (41.81%), Query Frame = 3
Query:  225 DFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLD-----ESLLIHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII-----NNRAIIPIPFDTPDGDITILIGDWYTRNHTA--LRKTLDAGEGLGMPDGVLI 716
            D  +S    +P G+ +  +   G FPGP I             + L      +S  IHW GI Q  ++W DG    N CPI    ++ Y F V DQ G+F+Y   L  Q   G  G  ++      N ++    +D  D    I + DWY   HTA  L     AG     PD VLI
Sbjct:   30 DLTISNADVTPDGITRAAVLAGGVFPGPLITGNKGDEFQINVIDNLTNETMLKSTTIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDDANASL----YDVDDDTTVITLADWY---HTAAKLGPAFPAG-----PDSVLI 194          
The following BLAST results are available for this feature:
BLAST of CK934199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
LAC15_ORYSJ2.444e-1330.52Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC8_ORYSJ3.192e-1332.87Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 ... [more]
LAC23_ORYSJ5.444e-1329.25Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC14_ARATH1.584e-1227.34Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 S... [more]
LAC1_THACU2.069e-1229.38Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 ... [more]
LAC1_TRAHI3.529e-1230.57Laccase OS=Trametes hirsuta PE=1 SV=1[more]
LAC1_TRAVI6.019e-1231.76Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1[more]
LAC1_ORYSJ1.751e-1131.19Putative laccase-1 OS=Oryza sativa subsp. japonica... [more]
LAC5_TRAVI2.287e-1131.07Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2[more]
LAC5_TRAVE2.287e-1131.07Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934199 ID=CK934199; Name=CK934199; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTCTTTTTTTTTGGGCGGGGGGGGTTTGATAATGTAA
TACCCAGGTAAAAAGCTGAAGGAATTTTTGCTCTAAATTTGTTCAAAAGA
CGCCCAAAGTTGGAAAAAGAAAAAGATTCACAAAATGGCTTTGTGTAGAG
GCTTATCTTTGTTGGCTATCCACATTGCCTTGCTCGCGAGCTTGTGTTCT
GCTGCAGATCTGTTTGTTTACTTCGACTTTGAGGTTTCTTATATCACTGC
TTCTCCTCTTGGTGTGCCCCAGCAGGTTATTGCTATTAACGGCAAGTTTC
CAGGTCCGACTATAAATGTGACTACTAACAACAATGTCGTTGTCAATGTG
AGAAACAAATTAGACGAAAGTCTACTTATCCACTGGTCTGGCATTCAACA
AAGGCGTAGCTCATGGCAAGATGGACTTTTGGGCACCAATTGTCCCATTC
CTCCAAAGTGGAACTGGACTTACCAGTTTCAGGTTAAGGACCAAGTTGGA
AGTTTCTTTTACTTCCCATCCCTCCATTTTCAGAGAGCATCGGGCGGTTT
CGGTGGCTTTATAATTAACAACCGAGCTATTATTCCAATTCCTTTTGATA
CCCCAGATGGGGATATTACAATTTTGATTGGCGATTGGTACACGAGGAAC
CACACGGCTCTGAGAAAGACACTTGATGCTGGGGAAGGTCTAGGAATGCC
AGATGGGGTGCTAATCAA
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