CK934199

Overview
NameCK934199
Unique NameCK934199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10938 contig Csv1_Contig10938:31..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC5_ORYSJ (Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 43/165 (26.06%), Postives = 74/165 (44.85%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDI-TILIGDWYTRNHTA-LRKTLDAGEGLGMPD 704
            ++ F V     + L V + +  +NG+FPGP +             N ++ ++  HW GI Q R+ W DG    T CPI    ++ Y F V  Q G+ ++     + R    +G  +I  +     PF  P  ++  I+ G+W+  +  A + + L  G G  + D
Sbjct:   39 HYTFNVQMTNVTRLCVTKSIPTVNGQFPGPKLVVREGDRLVVKVHNHMNYNVSFHWHGILQLRNGWADGPSYITQCPIQGGGSYVYDFTVTGQRGTLWWHAHFSWLRVH-LYGPLVILPKRGEGFPFPRPYKELPPIMFGEWFNADTEAVINQALQTGAGPNISD 202          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_PYCCI (Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 43/149 (28.86%), Postives = 66/149 (44.30%), Query Frame = 3
Query:  225 DFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLL-----IHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII----NNRAIIPIPFDTPDGDITILIGDWY 641
            D  ++    SP G  ++ + +NG  P P I             + L    +     IHW G  Q  ++W DG+   N CPI    ++ Y FQV DQ G+F+Y   L  Q   G  G F++    + +A +   +D  + D  I + DWY
Sbjct:   28 DLTLTNAAVSPDGFSREAVVVNGITPAPLIAGQKGDRFQLNVIDNLTNHTMLKTTSIHWHGFFQHGTNWADGVSFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPQASL---YDIDNDDTVITLADWY 173          
The following BLAST results are available for this feature:
BLAST of CK934199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
LAC5_ORYSJ6.655e-1126.06Putative laccase-5 OS=Oryza sativa subsp. japonica... [more]
LAC1_PYCCI8.691e-1128.86Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934199 ID=CK934199; Name=CK934199; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTCTTTTTTTTTGGGCGGGGGGGGTTTGATAATGTAA
TACCCAGGTAAAAAGCTGAAGGAATTTTTGCTCTAAATTTGTTCAAAAGA
CGCCCAAAGTTGGAAAAAGAAAAAGATTCACAAAATGGCTTTGTGTAGAG
GCTTATCTTTGTTGGCTATCCACATTGCCTTGCTCGCGAGCTTGTGTTCT
GCTGCAGATCTGTTTGTTTACTTCGACTTTGAGGTTTCTTATATCACTGC
TTCTCCTCTTGGTGTGCCCCAGCAGGTTATTGCTATTAACGGCAAGTTTC
CAGGTCCGACTATAAATGTGACTACTAACAACAATGTCGTTGTCAATGTG
AGAAACAAATTAGACGAAAGTCTACTTATCCACTGGTCTGGCATTCAACA
AAGGCGTAGCTCATGGCAAGATGGACTTTTGGGCACCAATTGTCCCATTC
CTCCAAAGTGGAACTGGACTTACCAGTTTCAGGTTAAGGACCAAGTTGGA
AGTTTCTTTTACTTCCCATCCCTCCATTTTCAGAGAGCATCGGGCGGTTT
CGGTGGCTTTATAATTAACAACCGAGCTATTATTCCAATTCCTTTTGATA
CCCCAGATGGGGATATTACAATTTTGATTGGCGATTGGTACACGAGGAAC
CACACGGCTCTGAGAAAGACACTTGATGCTGGGGAAGGTCTAGGAATGCC
AGATGGGGTGCTAATCAA
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