CK934200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 9.560e-27 Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 ++RI+N +RQVTF+KRRNGLLKKA ELS+LCDAEV L++FS+ G+LYEF SS++M ++RY A E + E+ Q+E L+ + LQ S + L+GEEL L ++L+ LE +L++SL+ IR + + + EL K L+ + Sbjct: 8 IRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRYT----NAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQ 160
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.781e-26 Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ-KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 ++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E ++ +M +ERYQ G EP R+ + ++Q L+ + LQR R+ G G + +L +LE+ L++ + QIR+T+ Q M + L++KE +L E Sbjct: 8 MRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKE 162
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.781e-26 Identity = 66/159 (41.51%), Postives = 102/159 (64.15%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS G+LY+F SSSSM +ERYQ+ A E + + + Q+E L+ + + L + R LLGEE+ ++L+ L+ Q++MSL IR+ + Q + + + +L K L+ + Sbjct: 8 IKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQE----AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQK 161
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 3.633e-26 Identity = 70/156 (44.87%), Postives = 100/156 (64.10%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLL 533 +++I++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN KLY+F +SSS+ T+ER+ N E A E+ Q+E L+ +LQ + R L G EL L+ KEL+++E QL+MSL+ IR R Q + + + EL K L+ Sbjct: 8 IQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERF---NTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLV 159
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.744e-26 Identity = 71/153 (46.41%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQ 527 +KRIEN +RQVTF+KRR GLLKKA+ELSVLCDAEVA+I+FS GKL+EF SS+SM KTL RY + P ++ + + + L LK LQ ++ G+ L L+ KEL+ LE+QL+ SL +R + + L E + KEQ Sbjct: 8 IKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF-SSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDL-LKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQ 158
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.380e-25 Identity = 66/159 (41.51%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKC-NYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + L+ L E+YQ N E N + LE++ ++K E L+ R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KEQ+L + Sbjct: 8 IKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMT------RMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILED 160
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.851e-25 Identity = 70/153 (45.75%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQ 527 +KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS GKL+E+ SS+ M +TL RY N+ + + + + E+ LK + LQ L G+ L PL KEL+SLE+QL +L +R + + + + L E + KEQ Sbjct: 8 IKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYG--NHQSSSASKAEEDCAEVDI------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQ 151
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.947e-25 Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S GKLY F S +++K L+RY K + A + L Q + L + YE L+ L+G + ++ L LE L+ +L R+ +T+ ML + L+ KE++L E Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQH---------ADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKE 155
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.603e-24 Identity = 66/158 (41.77%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK-EQLLSE 539 +++I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+EFC SSSM + LER+ + + + + E L+L ++ ++ R + GEEL L+ +EL+ LE+ L+ L ++ T++ ++ ++ELQ K QL+ E Sbjct: 8 IRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC-SSSMKEVLERHNLQSKNLEKLDQPSLE-LQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDE 163
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.603e-24 Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+CS SM + + RY + GA P R L E K++ LQ S + G++L +EL LE+QL+ +L +IR+ + + M + L+ E++L + Sbjct: 11 VKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEK 163 The following BLAST results are available for this feature:
BLAST of CK934200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934200 ID=CK934200; Name=CK934200; organism=Citrus sinensis; type=EST; length=569bpback to top |