CK934200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.579e-21 Identity = 60/157 (38.22%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F +S+SM + ++RY + S + L+ +LK R + GEEL LN ++L+ LE+ L+ L + T+++ +LD + L+ K L E Sbjct: 27 IRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF-ASTSMEQIIDRYNSHSKTLQRAEPSQLD-LQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIE 181
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 64/158 (40.51%), Postives = 93/158 (58.86%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRIEN+ NRQVT++KRRNGL KKA EL+VLCDA+V++I+ S+ GKL+EF S S K L + YQK V + Q++ KLK L++ R +GE L LN ++LE L +D SLK IR + + + + + + K + + E Sbjct: 8 IKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQK------TVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEE 159
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKE 524 +KRIEN NRQVT++KRR G++KKA EL+VLCDA+VA+I+FS+ GK +EFCS S+ +K + +RYQ+ S + Q+ LK L+ R +GE+L L EL LE+ +D +LK++R R +++ T TE K+ Sbjct: 8 IKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRH-RKYHVITTQTETYKKK 153
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ-QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRIENK +RQVTF+KRRNGL++KA +LS+LC++ +A+++ S GKLY+ S +M K ++RY+ + EAL+L+ + + YL LK E L+ Q L + + L SLE QL+ +L R+ +T+ M+ + LQ E LL E Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE-------IHHADELEALDLAEKTRNYLPLK---ELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLRE 155
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.002e-21 Identity = 61/162 (37.65%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSML-KTLERYQKCN----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRIEN NR VTF+KRRNGL+KKA E++VLCDA+VALIIF++ GK+ ++C S L L++YQK + + A N+S E ++K ++LQ R+L GE++ LN K L ++E ++ L ++R + ++ L + E++++E Sbjct: 8 IKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLS----------NEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVR----DHQMEILISKRRNEKMMAE 155
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.838e-21 Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS-MLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+FS GKL EFCS + M + ++RY N G P+ + +L + E L+ + L+ R G +L + EL+ LERQL+ S+ ++R + + M L L K ++L E Sbjct: 8 IKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTN-GLRLPD-HHDDQEQLHHEMELLRRETC--NLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEE 161
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.746e-20 Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK 521 LK+IEN NRQVTF+KRR GLLKKA EL++LCDA++ +I+FS GK+YE+ S + + +RY K AP + ++ QE ++K L+ R +G++L L +++ +LE+Q++ SL ++R + Q + L E+ + Sbjct: 8 LKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLK----APSTRFEEMD-VQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.746e-20 Identity = 55/145 (37.93%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYM 491 +KRIEN NRQVT++KRRNG++KKA E+SVLCDA V++IIF++ GK++EFCS S++++ L+ Y K +S + + + E ++K +++Q R+L GE++ LN KEL LE L+ +++ + +++ Sbjct: 8 IKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHK---------LSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFV 143
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.890e-20 Identity = 54/158 (34.18%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNS-KELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 +KRIE+ RQVTF+KRR G LKKA EL+VLCDA+V +++FS++GKL++FCS +L +E + + + + E +L+ + L+ S R GE+L +++ EL L+ QL+ SL ++ + + + M L +++ Q + E Sbjct: 8 MKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVIL--MELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHE 163
BLAST of CK934200 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.081e-20 Identity = 64/178 (35.96%), Postives = 104/178 (58.43%), Query Frame = 3 Query: 69 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERY--QKCNYGA--PEPNV--------------SAREALELSSQQEYLKLKARYEALQRSQ---RNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 539 ++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F +SS+M + +++Y N G +P++ ++ + L Q E+ K + E L + R + GEEL L+ +EL+ +E+ L+ L+++ T+ Q + ++ELQ K L+E Sbjct: 8 IRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAE 184 The following BLAST results are available for this feature:
BLAST of CK934200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934200 ID=CK934200; Name=CK934200; organism=Citrus sinensis; type=EST; length=569bpback to top |