CK934203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.092e-30 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLG G P Sbjct: 72 LTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 118 HSP 2 Score: 61.2326 bits (147), Expect = 3.092e-30 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+LS+NGVKFGEAVWFKAG+QIFSEG Sbjct: 110 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 144
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.092e-30 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLG G P Sbjct: 73 LTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 119 HSP 2 Score: 61.2326 bits (147), Expect = 3.092e-30 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+LS+NGVKFGEAVWFKAG+QIFSEG Sbjct: 111 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 145
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.093e-30 Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115 HSP 2 Score: 60.077 bits (144), Expect = 3.093e-30 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.093e-30 Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG G P Sbjct: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 114 HSP 2 Score: 60.077 bits (144), Expect = 3.093e-30 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 106 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 140
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.093e-30 Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115 HSP 2 Score: 60.077 bits (144), Expect = 3.093e-30 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.093e-30 Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115 HSP 2 Score: 63.1586 bits (152), Expect = 3.093e-30 Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPEILSKNGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.093e-30 Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115 HSP 2 Score: 63.1586 bits (152), Expect = 3.093e-30 Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPEILSKNGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.094e-30 Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG G P Sbjct: 65 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 111 HSP 2 Score: 60.077 bits (144), Expect = 3.094e-30 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 103 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 137
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.865e-30 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLG G P Sbjct: 10 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFP 56 HSP 2 Score: 61.2326 bits (147), Expect = 6.865e-30 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+LS+NGVKFGEAVWFKAG+QIFSEG Sbjct: 48 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 82
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.157e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 60.077 bits (144), Expect = 1.157e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 143 The following BLAST results are available for this feature:
BLAST of CK934203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934203 ID=CK934203; Name=CK934203; organism=Citrus sinensis; type=EST; length=227bpback to top |