CK934203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.157e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 60.077 bits (144), Expect = 1.157e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.157e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 60.077 bits (144), Expect = 1.157e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.157e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 60.077 bits (144), Expect = 1.157e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.157e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 60.077 bits (144), Expect = 1.157e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.158e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115 HSP 2 Score: 60.077 bits (144), Expect = 1.158e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.158e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 116 HSP 2 Score: 60.077 bits (144), Expect = 1.158e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 142
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.158e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115 HSP 2 Score: 60.077 bits (144), Expect = 1.158e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.158e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115 HSP 2 Score: 60.077 bits (144), Expect = 1.158e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.158e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 116 HSP 2 Score: 60.077 bits (144), Expect = 1.158e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 142
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.507e-29 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLG G P Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFP 116 HSP 2 Score: 58.9214 bits (141), Expect = 1.507e-29 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFS+G Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDG 142 The following BLAST results are available for this feature:
BLAST of CK934203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934203 ID=CK934203; Name=CK934203; organism=Citrus sinensis; type=EST; length=227bpback to top |