CK934203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.640e-29 Identity = 39/47 (82.98%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLG G P Sbjct: 70 LTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFP 116 HSP 2 Score: 61.2326 bits (147), Expect = 5.640e-29 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L+KNG+KFGEAVWFKAGAQIFSEG Sbjct: 108 LGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEG 142
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.342e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 57.3806 bits (137), Expect = 7.342e-29 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFK G+QIFS+G Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.559e-29 Identity = 40/47 (85.11%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 59.3066 bits (142), Expect = 9.559e-29 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+ ++NG+KFGEAVWFKAGAQIFSEG Sbjct: 109 LGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.559e-29 Identity = 40/47 (85.11%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTA LSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 60.077 bits (144), Expect = 9.559e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.561e-29 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXG 136 L+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG G Sbjct: 69 LSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111 HSP 2 Score: 56.9954 bits (136), Expect = 9.561e-29 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G V PE+L+KNGVKFGEAVWFKAG+QIF+EG Sbjct: 107 LGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.620e-28 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117 HSP 2 Score: 56.225 bits (134), Expect = 1.620e-28 Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+ ++NGVKFGEAVW KAG+QIFSEG Sbjct: 109 LGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEG 143
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.621e-28 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 116 HSP 2 Score: 56.225 bits (134), Expect = 1.621e-28 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEA WFKAG+QIFS+G Sbjct: 108 LGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDG 142
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.841e-27 Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADP TFAKNR+LEVIH RW MLG G P Sbjct: 70 LTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFP 116 HSP 2 Score: 56.9954 bits (136), Expect = 3.841e-27 Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+ ++NGVKFGEAVWFKAG+QIF EG Sbjct: 108 LGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEG 142
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.435e-26 Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 L GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLG G P Sbjct: 72 LNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTP 118 HSP 2 Score: 56.225 bits (134), Expect = 1.435e-26 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G + PE+L+K+GVKFGEAVWFKAGAQIFSEG Sbjct: 110 LGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEG 144
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.869e-26 Identity = 37/47 (78.72%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDT GLSADPETFAKNRELEVIH RWA+ G P Sbjct: 68 LTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFP 114 HSP 2 Score: 58.151 bits (139), Expect = 1.869e-26 Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 3 Query: 135 GGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 G VFPE+L++NGVKFGE VWFKAG+QIFSEG Sbjct: 110 GCVFPELLARNGVKFGEGVWFKAGSQIFSEG 140 The following BLAST results are available for this feature:
BLAST of CK934203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934203 ID=CK934203; Name=CK934203; organism=Citrus sinensis; type=EST; length=227bpback to top |