CK934209

Overview
NameCK934209
Unique NameCK934209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:608..1208. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.546e-12
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 1 
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 225
            AM++AL LEK  N+ LL L  +   ++D QM DF+ESEFL EQV++I +++ Y++ L+ VG G G + FD+  L
Sbjct:   97 AMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYIFDKETL 170
The following BLAST results are available for this feature:
BLAST of CK934209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
FRIS_LYMST7.546e-1245.95Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_B07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934209 ID=CK934209; Name=CK934209; organism=Citrus sinensis; type=EST; length=604bp
GGGGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACAAACGAGAAGCT
TCTGAGCCTGCGCAGTGTGGCGGATAGAAACAATGATCCCCAAATGGGAG
ATTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAG
ATCGCTAAATATGTTTCTCAACTTAGGATGGTTGGGAAAGGCCACGGAGT
ATGGCACTTCGATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAA
GAACCATATTGTTACATTTCTTTGTGGTTTAGTCAACTCTTTGCTGCTAA
ACGTTCTGAAGTATCTCTGCCACAGGAGGTTGAATGTGTTGTCAAAAAAT
AAGCTGAAACAGTGATAAGTCCTACAAAGTCAATACTCAATAGCCTCCTT
GCTTTATCATATTAGTGTGGTCGCTTTTAGATAGTCTTTTTTATGGTGCT
TTTTCTTTATTTAGTAACAGACAGTGTGAAGGGATCTAATAGTTTAAGCA
GAGCGCCAAATCCATCTTCTGATTGTATAAATATAATTAAGTTGTTCAAT
AAAAGTTCTGTTTCTGCCCTGGATAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
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