CK934214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934214 vs. ExPASy Swiss-Prot
Match: Y4AF_RHISN (Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13 Identity = 66/236 (27.97%), Postives = 103/236 (43.64%), Query Frame = 2 Query: 155 PYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDH-VFNFAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDEC 844 P + + RI V G G + S I R L SE +I +D +K + +T +F L K H V AA +GG+ + + +Y N ++ N++E S SGV++ + S+CIYP K + + P EP + Y + K+A +LC+ Y K +G N+YGP + A RKA + K +WG G TR F + ++C Sbjct: 2 PMYLLDGKRIWVAGHKGMVGSAIIRSLASEDCEVIVADRQKLD-LTRQEEVEKFLL-------------KEKPHAVIMAAAKVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYP--KYAAQPIREEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDC 221
BLAST of CK934214 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13 Identity = 62/233 (26.61%), Postives = 109/233 (46.78%), Query Frame = 2 Query: 170 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNFAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 847 ++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V++ + VD +++ A+ ++ N + NT+ + NML ++ G R AS++ +Y + V + + W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL ++ ++G G QTR+F ++ + V Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EQLTVYGSGEQTRAFQYVSDLV 307
BLAST of CK934214 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13 Identity = 63/235 (26.81%), Postives = 105/235 (44.68%), Query Frame = 2 Query: 176 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH---MTEDMF------CHEFHLVDLRVMDNCLK--VTKGVDHVFNFAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 847 ++I +TG GFI SH+A++L +GHY+I D + + + ED F+ V L D+ K V + + V N AA G+ + N + +N + N+LE SR ++ YASS+ +Y T+ SD P Y K ++E + Y+ + + RF +YGP+ GR KA+ + +++ G R FT++D+ V Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAA-QAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQNLIYASSSSVY----GANTSKPFSTSDNID-HPLSLYAATKKSNELMAHTYSHLYNLPTTGLRFFTVYGPW-----GRPDMALFKFTKAIVNDQAIDVYNHGNMMRDFTYVDDIV 224
BLAST of CK934214 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12 Identity = 62/233 (26.61%), Postives = 107/233 (45.92%), Query Frame = 2 Query: 170 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNFAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 847 ++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V++ + VD +++ A+ ++ N + NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +G GR + F +AL + ++G G QTR+F ++ + V Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYG-----DPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGR--VVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLV 304
BLAST of CK934214 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11 Identity = 72/268 (26.87%), Postives = 112/268 (41.79%), Query Frame = 2 Query: 116 TYGAYTYEELEREPYWPSEKLRIS--------VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-------------FCHEFHLVDLRVMDNCLKVTKGVDHVFNFAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR-ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAL--TSTDKFEMWGDGLQTRSFTFIDECV 847 TYG +E+ R S ++R S VTGA GF+ +H++ LK G +I D N++ + F E + D+ ++ K+ HV + AA G+ + N S +++N N+LE + ++ +ASS+ +Y L T V E D +P Y K A EE+ Y +G+ RF +YGP+G + A F + L S FE G R FT+ID+ V Sbjct: 73 TYGGPAWEKRLRS----SARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLD-NFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVS-FTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYG----LNTKVPFSEKDKTD-QPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGR----PDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIV 324
BLAST of CK934214 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11 Identity = 65/225 (28.89%), Postives = 100/225 (44.44%), Query Frame = 2 Query: 182 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNFAADMGGMGFIQSNHSVIMYN---NTMISFNMLEASRISGVKRFFYASSA-CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 841 I VTG GFI SHI +L + +I D + EF D+R D K+ K V+ V + AA + +++ +Y+ N + + N+LE R + + +ASS +Y E L + + P P YGL K EE K Y + +GIE + R+ N+YG K G + F K L + ++GDG QTR F ++ + Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNINPKAEFVNADIRDKDLDEKINFKDVEVVIHQAAQINVRNSVENP----VYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVD------ENHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPK-GEAGVISIFIDKMLKNQSPI-IFGDGNQTRDFVYVGD 214
BLAST of CK934214 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11 Identity = 58/237 (24.47%), Postives = 97/237 (40.93%), Query Frame = 2 Query: 176 LRISVTGAGGFIASHIARRLKSEGHYIIASD---------WKKNEH----MTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNFAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 847 +R +TG GFI H+A+RL EGH+++ D K+ H + L D +D ++ + V A G+ + N + N + S+NMLE ++ K AS++ IY + E+D EP Y K + E + Y + + RF +YGP+ GR A+ + +++G+G +R FT+ID+ V Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAE--PEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPKHLMLASTSSIY----GANEKIPFAEADR-ADEPMTLYAATKKSMELMAHSYAHLYKVPTTSFRFFTVYGPW-----GRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLV 225 The following BLAST results are available for this feature:
BLAST of CK934214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934214 ID=CK934214; Name=CK934214; organism=Citrus sinensis; type=EST; length=847bpback to top |