CK934222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_OLIPU (DNA-directed RNA polymerase subunit beta' OS=Olimarabidopsis pumila GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_OENPA (DNA-directed RNA polymerase subunit beta' OS=Oenothera parviflora GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPATHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_OENGL (DNA-directed RNA polymerase subunit beta' OS=Oenothera glazioviana GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPATHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_OENEH (DNA-directed RNA polymerase subunit beta' OS=Oenothera elata subsp. hookeri GN=rpoC1 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPATHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_OENBI (DNA-directed RNA polymerase subunit beta' OS=Oenothera biennis GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPATHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_OENAR (DNA-directed RNA polymerase subunit beta' OS=Oenothera argillicola GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPATHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_NYMAL (DNA-directed RNA polymerase subunit beta' OS=Nymphaea alba GN=rpoC1 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_NICTO (DNA-directed RNA polymerase subunit beta' OS=Nicotiana tomentosiformis GN=rpoC1 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_NICSY (DNA-directed RNA polymerase subunit beta' OS=Nicotiana sylvestris GN=rpoC1 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_NASOF (DNA-directed RNA polymerase subunit beta' OS=Nasturtium officinale GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149 The following BLAST results are available for this feature:
BLAST of CK934222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934222 ID=CK934222; Name=CK934222; organism=Citrus sinensis; type=EST; length=378bpback to top |