CK934222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_GOSBA (DNA-directed RNA polymerase subunit beta' OS=Gossypium barbadense GN=rpoC1 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_DRANE (DNA-directed RNA polymerase subunit beta' OS=Draba nemorosa GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_DIOEL (DNA-directed RNA polymerase subunit beta' OS=Dioscorea elephantipes GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 130 C THVWYLKRLPSYIANLLDKPLKELEGLVYCDV Sbjct: 111 CPATHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_DAUCA (DNA-directed RNA polymerase subunit beta' OS=Daucus carota GN=rpoC1 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_CUCSA (DNA-directed RNA polymerase subunit beta' OS=Cucumis sativus GN=rpoC1 PE=3 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_CRUWA (DNA-directed RNA polymerase subunit beta' OS=Crucihimalaya wallichii GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_CHLSC (DNA-directed RNA polymerase subunit beta' OS=Chloranthus spicatus GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 130 C THVWYLKRLPSYIANLLDKPLKELEGLVYCDV Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_CERDE (DNA-directed RNA polymerase subunit beta' OS=Ceratophyllum demersum GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_CARPA (DNA-directed RNA polymerase subunit beta' OS=Carica papaya GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149
BLAST of CK934222 vs. ExPASy Swiss-Prot
Match: RPOC1_CAPBU (DNA-directed RNA polymerase subunit beta' OS=Capsella bursa-pastoris GN=rpoC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 26 CXXTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 142 C THVWYLKRLPSYIANLLDKPLKELEGLVYCD F R Sbjct: 111 CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 149 The following BLAST results are available for this feature:
BLAST of CK934222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934222 ID=CK934222; Name=CK934222; organism=Citrus sinensis; type=EST; length=378bpback to top |