CK934230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.105e-26 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 2 Query: 149 SKKITLKSSDGEAFEVDEAVALESQTIKHMI---------------------------------EDDCADNGI--PLPNVTSKILSKVIEYCKKHVEASKSD-DRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWA 607 + + L S +GE F VD+ +A S +K+ + +DD D+ I P+PNV S +L KVIE+ + H +++ D D S + +WD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI ND TP N+WA Sbjct: 3 TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.493e-23 Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 2 Query: 227 IKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLT 484 IK M EDDCADNGIPLPNVTSKIL VIEYCKKHV SK ++DLK WD +F+ K++Q+ LFD+++AANYLNI+SLLDLT Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVVESK---------EEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 47/141 (33.33%), Postives = 81/141 (57.45%), Query Frame = 2 Query: 158 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCADN---GIPLPN-VTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLT 565 I L+++DG +V++ VA+ I + +I+ + I LP V +LS + +YC+ H +S+ + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GKTPEEIR+ F++ +DLT Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFHQVPGRSNK--------ERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLT 150
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.712e-11 Identity = 45/141 (31.91%), Postives = 81/141 (57.45%), Query Frame = 2 Query: 158 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCA---DNGIPLPN-VTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLT 565 I L+++DG +V++ VA+ I + +I+ ++ I LP V + S +++YC+ H +S+ + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GK PEEIR+ F++ +DLT Sbjct: 18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQLPGRSNK--------ERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLT 150 The following BLAST results are available for this feature:
BLAST of CK934230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934230 ID=CK934230; Name=CK934230; organism=Citrus sinensis; type=EST; length=824bpback to top |