CK934232

Overview
NameCK934232
Unique NameCK934232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934232_ssr145 microsatellite CK934232_ssr145:145..159. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9795 contig Csv1_Contig9795:39..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.030e-22
Identity = 71/219 (32.42%), Postives = 108/219 (49.32%), Query Frame = 1
Query:  259 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTN-----DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            L+ +  +  +K K+ K Y+ +EE   R  V++ N+++     +   L   T    +  F+D+T  EF+   +G      N   RL   A  +   P +      LP   DWR+ G VT V+ QG C SCW+F  TGA+EG  F  TG+L+ LS Q L+DC            + GC  G   +AF+Y+L  GG+E E  YPY   + G C+++    +A
Sbjct:   23 LSLDVQWQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGS-FFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDC-------SKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE-GVCRYNPKNSSA 231          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  529 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 837
            LP   DWR  GAVT VK+QG+CGSCW+FS    +E  + + TG L+SLSEQ+LVDCD +         + GC GG    A++YI+  GG++ + +YPY    G
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQG 94          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.984e-21
Identity = 62/193 (32.12%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  259 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRD-HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 828
            L  +  F LF+ +F+++Y    E+  R  +F  NL +A+R Q  D  TA  G T FSDLT  EF + +       R P   +K       + +P   DWR     ++ VK+QG+C  CW+ +A   ++    +   + V +S Q+L+DC+          C +GCNGG +  A+  +L   G+  EKDYP+ G
Sbjct:   34 LELKEVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYGQERSPERTPNMTKKVESNTWGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQG 217          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.304e-20
Identity = 65/158 (41.14%), Postives = 81/158 (51.27%), Query Frame = 1
Query:  427 DLTPSEFRRQFLGL---------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            D+T  E  R   GL         N  L +P  + +AP           DWR  G VT VKDQG CGSCW+FS+ GALEG     TG+L+SLS Q LV C          S ++GC GG M +AFEY+    G++ E  YPY G D  SC +  +  AA
Sbjct:   85 DMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAA--------VDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQD-ESCMYSPTGKAA 224          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.955e-20
Identity = 71/220 (32.27%), Postives = 109/220 (49.55%), Query Frame = 1
Query:  232 DGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN------LRRAKRRQLLDPTAVHGVTKFSDLTPSEFR-RQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 861
            +GEQ     L  E  +  + +   K Y  Q+E+++R  +F++N      + +   + L+  T    +   +DLT  EF  R  L L  +  L    Q +       +  LP   DWR  GAVT V++QG CGSC++F+   ALE  H   TG L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT+   C++ +S
Sbjct:   78 NGEQRAMEKLETE--WKDYVTALGKHY-DQKENNFRMAIFESNELMTERINKKYEQGLVSYTTA--LNDLADLTDEEFMVRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTE-QRCRWQQS 283          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.195e-19
Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 1
Query:  532 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 858
            P   DWR+ GAVT VK+Q  CGSCW+FS    +EG + + TG+L+SLSEQ+L+DC++            GC+GG    + +Y++   GV  E++YPY    G     DK
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQYVVD-NGVHTEREYPYEKKQGRCRAKDK 100          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.155e-19
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  529 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 837
            +P   DWRD+GAV  VK+QG CG CW+F+A   +EG + +  G LV LSEQ+++DC          +   GC GG +N A+++I+   GV  +++YPY    G
Sbjct:    2 VPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC----------AVSYGCKGGWVNRAYDFIISNNGVTTDENYPYRAYQG 94          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.344e-19
Identity = 64/194 (32.99%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  277 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 837
            F  FK  F+K Y T E      + F A+L        ++      + +FSD++  EF+ Q+L        L +   L A AQ   I   N +P + D R  G VT +K+Q ACGSCW+FS    +E  +       + LSEQ+LVDC          +   GC G  + +   YI K G VE E+ YPY   +G
Sbjct:   26 FEEFKKAFNKHYVTPEAEQEARQNFLASLEH------IEKAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVN-IPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDC----------ASQHGCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREG 201          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 58/188 (30.85%), Postives = 92/188 (48.94%), Query Frame = 1
Query:  289 KSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP----TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG-GVEREKDYPYTGTDG 837
            ++ F+ T+    E +     F+ +L R +    L P    TA +G+ +FS L P EF+  +L           A+    +P   LP  FDWRD   VT V++Q  CG CW+FS  GA+E A+ +    L  LS QQ++DC +          + GCNGG   +A  ++ K    + ++ +YP+   +G
Sbjct:   26 RAPFTPTWPRSREREAA--AFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN---------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNG 202          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 82/291 (28.18%), Postives = 127/291 (43.64%), Query Frame = 1
Query:   49 FLLSFWKHLLSASSCFAVHWNKSK----MERLIXXXXXXXXXXXXXXXXXXXNDDDAMIRQV--VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFR---------RQFLGLNRRLRLPADAQKAPILPTN-----------DLPT----DFDWRDHGAVTGVKDQGA-CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 828
            FLL+F+   LS++S     + +SK     + L                     ++   IRQ   + SD E   D L+     F  F  K+ K + + ++   RF  F+ N    K  +  +P ++  + KFSDL+  EF+         + +  L++ L     + K PI  +            DL      + +W    AV+ +KDQG  CGSCW+FS+  ++E  + L   +   LSEQ+LV+CD             GC GGL  +A EYI  + GV  E + PYTG
Sbjct:   42 FLLTFFILALSSASILTYFFFRSKSITNFKSLAIEHIESHYPSMDPSKRAGFVEEIVKIRQTGKITSDAESELDMLIE----FDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVKTHKPTEPYSLD-LNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD---------KSSMGCAGGLPITALEYI-HSKGVSFESEVPYTG 317          
The following BLAST results are available for this feature:
BLAST of CK934232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATQ_RAT9.030e-2232.42Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
ERVC_TABDI2.012e-2145.63Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATW_MOUSE9.984e-2132.12Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATK_CHICK1.304e-2041.14Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATL_BRUPA4.955e-2032.27Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
MEX1_JACME4.195e-1941.28Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
MDO1_PSEMR7.155e-1940.78Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
PEPT1_PSOOV9.344e-1932.99Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATO_HUMAN2.719e-1830.85Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CYSP_THEAN6.057e-1828.18Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934232 ID=CK934232; Name=CK934232; organism=Citrus sinensis; type=EST; length=878bp
GGGGGAGAAATTAGGTGTCGAAATCTCATACGCGGACCCAACCACAAGTT
TCTTCTGTCTTTTTGGAAACATTTATTATCTGCTTCATCCTGCTTTGCAG
TCCACTGGAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTC
CTCCTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGA
CGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAG
ATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTC
TCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTT
CAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTG
CTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGC
CGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCA
AAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGC
GTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCG
TGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATC
GACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATC
ACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGT
GGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGA
GCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAAT
TTGACAAAAGCAAAATTGCTGCAGCTGT
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