CK934232

Overview
NameCK934232
Unique NameCK934232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934232_ssr145 microsatellite CK934232_ssr145:145..159. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9795 contig Csv1_Contig9795:39..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1
Query:  532 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 870
            P   DWR  G VT ++DQG CGSC++F +  ALEG   +  G   E + LSE+ +V C  E         ++GCNGGL ++ + YI++  G+ +E DYPYTG+D  +C+ D    A
Sbjct:   95 PKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTRE-------DGNNGCNGGLGSNVYNYIME-NGIAKESDYPYTGSD-STCRSDVKAFA 201          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17
Identity = 61/193 (31.61%), Postives = 90/193 (46.63%), Query Frame = 1
Query:  277 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 834
            F  FK  F+K YAT EE +   + F  +L+  +  +         +   SDL+  EF+ ++L        L  +  L A+     I   N +P++ D R    VT ++ QG CGSCW+FS   A E A+       + LSEQ+LVDC          +   GC+G  +    EYI + G VE E+ YPY   +
Sbjct:   26 FEEFKKAFNKNYATVEEEEVARKNFLESLKYVEANK-------GAINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVN-VPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC----------ASQHGCHGDTIPRGIEYIQQNGVVE-ERSYPYVARE 199          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.349e-17
Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  532 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 849
            P   DWR  G VT ++DQ  CGSC++F +  ALEG   +  G     + LSE+ LV C  +       + ++GCNGGL ++ ++YI++  GV +E DYPYTGTD  +CK
Sbjct:   88 PESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRD-------NGNNGCNGGLGSNVYDYIIQ-NGVAKESDYPYTGTD-STCK 187          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 60/193 (31.09%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  277 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 834
            F  FK  F+KTYAT E+ +   + F  +L+  +  +         +   SDL+  EF+ QFL        L  +  L A+     I   + LP++ D R    VT ++ QG CGSCW+FS   + E A+       + L+EQ+LVDC          +  +GC+G  +    EYI +  GV +E  YPY   +
Sbjct:   26 FEEFKKAFNKTYATPEKEEVARKNFLESLKYVESNK-------GAINHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVS-LPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC----------ASQNGCHGDTIPRGIEYI-QQNGVVQEHYYPYVARE 199          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 1
Query:  532 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 870
            P   DWR  G VT ++DQ  CGSC++F +  ALEG   +  G     + LSE+ +V C  +       + ++GCNGGL ++ ++YI++  GV +E DYPYTG+D  +CK +    A
Sbjct:   95 PESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRD-------NGNNGCNGGLGSNVYDYIIE-HGVAKESDYPYTGSD-STCKTNVKSFA 201          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 54/159 (33.96%), Postives = 78/159 (49.06%), Query Frame = 1
Query:  397 TAVHGVTKFSDLTPSEFRRQFLGLNRRL--RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG-GVEREKDYPYTGTDGGSCKFDKSK 864
            TA +GV +FS L P EF+  +LG       R PA+ Q+   +P   LP  FDWRD   V  V++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  ++ +    +  +  YP+   +G    F +S+
Sbjct:   55 TAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP--IPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQ 202          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 1
Query:  529 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 855
            +P   DWRD+GAVT VK+Q  CG+CW+F+A   +E  + +  G L  LSEQQ++DC          +   GC GG    AFE+I+   GV     YPY     G+CK D
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC----------AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAK-GTCKTD 99          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 68/224 (30.36%), Postives = 99/224 (44.20%), Query Frame = 1
Query:  238 EQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDP---TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP----------------TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL-VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 846
            E  +D++  A   F   K   +K Y   +E   RF  FK   ++  K  +++     T V  V ++SD +  EF   F  L   L +P D +   I+P                + D P   D+R        KDQG CGSCW+F+A G  E  +  +  E+ +S SEQQ+VDC  E         + GC+GG    AF Y++   GV    +YPY G +   C
Sbjct:  150 ESMQDNIKYASKFFKYMKEN-NKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYFKKL---LSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE---------NYGCDGGNPFYAFLYMIN-NGVCLGDEYPYKGHEDFFC 359          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  532 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 849
            P   DWR  G VT ++DQ  CGSC++F +  ALEG   +  G     + LSE+ +     +C  +     ++GCNGGL ++ ++YI++  GV +E DYPYTG+D  +CK
Sbjct:   91 PESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHM-----QCTRDNG---NNGCNGGLGSNVYDYIIE-HGVAKESDYPYTGSD-STCK 189          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 57/198 (28.79%), Postives = 90/198 (45.45%), Query Frame = 1
Query:  277 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 849
            F  +K  F+K+YAT E+ +   + F  +++  +            +   SDL+  EF+ +FL        L  +  L A+     I    + P + D R    VT ++ QG CGSCW+FS   A E A+     + + L+EQ+LVDC          +   GC+G  +    EYI +  GV +E  Y Y   +  SC+
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNG-------GAINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSI--NGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEYI-QHNGVVQESYYRYVARE-QSCR 202          
The following BLAST results are available for this feature:
BLAST of CK934232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CPP1_ENTHI6.057e-1840.52Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
PEPT1_DERFA1.033e-1731.61Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
CPP3_ENTHI1.349e-1742.20Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
PEPT1_EURMA3.006e-1731.09Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CPP2_ENTHI6.697e-1738.79Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATO_MOUSE1.492e-1633.96Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
BROM2_ANACO1.948e-1641.28Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP_PLAVN9.670e-1630.36Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
ACP2_ENTHI6.268e-1539.45Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
PEPT1_DERPT1.396e-1428.79Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934232 ID=CK934232; Name=CK934232; organism=Citrus sinensis; type=EST; length=878bp
GGGGGAGAAATTAGGTGTCGAAATCTCATACGCGGACCCAACCACAAGTT
TCTTCTGTCTTTTTGGAAACATTTATTATCTGCTTCATCCTGCTTTGCAG
TCCACTGGAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTC
CTCCTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGA
CGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAG
ATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTC
TCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTT
CAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTG
CTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGC
CGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCA
AAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGC
GTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCG
TGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATC
GACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATC
ACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGT
GGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGA
GCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAAT
TTGACAAAAGCAAAATTGCTGCAGCTGT
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