CK934258
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX30_XENLA (Sorting nexin-30 OS=Xenopus laevis GN=snx30 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.078e-20 Identity = 57/117 (48.72%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 L V+V DP K ++ YI+Y V TKT E+ PE V RRY DF WLR++L E FIPPLPEK V+ RFS EF+E RR+ LD F+ RIA HP L +E FL A + Sbjct: 106 LFVTVDDPKKHVCTMETYITYSVSTKTTRTEFDLPEYSVRRRYQDFDWLRNKLEETQPTHFIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRIADHPVLSFNEHFNVFLTAKD 222
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX30_MOUSE (Sorting nexin-30 OS=Mus musculus GN=Snx30 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.187e-19 Identity = 66/193 (34.20%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELENHLADAQKHAXRLVK 918 L V+V DP K ++ YI+YR+ TK+ E+ PE V RRY DF WLR++L E IPPLPEK V+ RFS EF+E RR+ LD F+ RI HP L +E FL A +D +KK+ L+ + V+ + +P+ E+ + Y+ L + A R++K Sbjct: 91 LFVTVDDPKKHVCTMETYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRNKLEESQPTHLIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRITDHPVLSFNEHFNVFLTA----------KDLNAYKKQGIALLSRVGESVKHVTGGYKLRSRPL-----EFAAISDYLDTFALKLGTIDRIAQRIIK 268
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX30_DANRE (Sorting nexin-30 OS=Danio rerio GN=snx30 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.187e-19 Identity = 54/117 (46.15%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 L V+V DP K + ++ YI+YRV TKT E+ PE V RRY DF WLR +L + IPPLPEK ++ RFS EF+E RR+ LD F+ R+A HP L +E FL A + Sbjct: 82 LFVTVDDPKKHVSTMETYITYRVCTKTTRTEFDLPEYSVRRRYQDFDWLRIKLEDSQPTHLIPPLPEKFVMKGVVDRFSEEFVETRRKALDKFLKRVADHPVLSFNEHFNAFLSAKD 198
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX30_HUMAN (Sorting nexin-30 OS=Homo sapiens GN=SNX30 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18 Identity = 66/193 (34.20%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELENHLADAQKHAXRLVK 918 L V V DP K ++ YI+YR+ TK+ E+ PE V RRY DF WLR +L E IPPLPEK V+ RFS EF+E RR+ LD F+ RI HP L +E FL A +D +KK+ L+ + V+ + +P+ E+ + Y+ L + A R++K Sbjct: 91 LFVIVDDPKKHVCTMETYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRITDHPVLSFNEHFNIFLTA----------KDLNAYKKQGIALLTRMGESVKHVTGGYKLRTRPL-----EFAAIGDYLDTFALKLGTIDRIAQRIIK 268
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX4_CRYNE (Sorting nexin-4 OS=Cryptococcus neoformans GN=SNX4 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.713e-18 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 343 YLSVSVTDPVKLGNGVQ-AYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF---RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 ++ V V +P K G + Y+SY V T+T+ P ++ P +V RR+ DFV+LR+ L + + +PP+P+K +E RFS EF+E RR L F +RIA HP LQ+S+ + FLQ+ E Sbjct: 89 WMDVQVREPAKEHEGSKDMYVSYAVKTETSLPTFRKPLTVVRRRFQDFVFLREHLVKNFPACVVPPIPDKHRLEYIKGDRFSPEFVERRRLDLQRFADRIARHPVLQRSQLVNDFLQSTE 208
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX2_PONAB (Sorting nexin-2 OS=Pongo abelii GN=SNX2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 + + V+DP K+G+G+ AY++YRV TKT+ + E V RR+SDF+ L +L KY G +PP PEKS V ++ S EF+E RR L+ ++ R HP L Q DL+ FL++ E Sbjct: 142 IEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSE 266
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX2_MOUSE (Sorting nexin-2 OS=Mus musculus GN=Snx2 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 + + V+DP K+G+G+ AY++YRV TKT+ + E V RR+SDF+ L +L KY G +PP PEKS V ++ S EF+E RR L+ ++ R HP L Q DL+ FL++ E Sbjct: 142 IEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSE 266
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX2_MACFA (Sorting nexin-2 OS=Macaca fascicularis GN=SNX2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 + + V+DP K+G+G+ AY++YRV TKT+ + E V RR+SDF+ L +L KY G +PP PEKS V ++ S EF+E RR L+ ++ R HP L Q DL+ FL++ E Sbjct: 142 IEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSE 266
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX2_HUMAN (Sorting nexin-2 OS=Homo sapiens GN=SNX2 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 + + V+DP K+G+G+ AY++YRV TKT+ + E V RR+SDF+ L +L KY G +PP PEKS V ++ S EF+E RR L+ ++ R HP L Q DL+ FL++ E Sbjct: 142 IEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSE 266
BLAST of CK934258 vs. ExPASy Swiss-Prot
Match: SNX2_BOVIN (Sorting nexin-2 OS=Bos taurus GN=SNX2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 346 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADE 690 + + V+DP K+G+G+ AY++YRV TKT+ + E V RR+SDF+ L +L KY G +PP PEKS V ++ S EF+E RR L+ ++ R HP L Q DL+ FL++ E Sbjct: 142 IEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSE 266 The following BLAST results are available for this feature:
BLAST of CK934258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934258 ID=CK934258; Name=CK934258; organism=Citrus sinensis; type=EST; length=921bpback to top |