CK934264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.518e-29 Identity = 67/180 (37.22%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLC-HPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGR 630 LPEECV+ + S T P DAC A+ SDI+W+KF+P ++ ++S+S F SKKEL+ LC LID GK S +EK++ K+ ++SA L+I W ++P W W+ ++RF VA L EI G+I ++++S T Y AY++ K + YG ++ A E+ + + G+ Sbjct: 39 LPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQS-RAFKFLSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQ 217
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: PP2B5_ARATH (F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP2B5 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.883e-28 Identity = 72/199 (36.18%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 85 FNVLPEECVATVFSLTC-PLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASKGKAYLGSKQKSN 678 F+ LP++C+A + S T P DA +SD +W+KFLP P+ VS FSSKKEL+ LC PF GK+SF+L+K+SGKK +LSA+ L I+ NP YW W+S+ ESRF EV L + +I G + T+++S T Y AY++ + G + + + SK SK++ + Sbjct: 34 FDDLPDDCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPP--PDYVSLLPKSRVFSSKKELYFALCDPFPNHNGKMSFRLDKASGKKCVMLSAKKLLISRVVNPKYWKWISIPESRFDEVPELLNIDSFDIRGVLNTRIISPGTHYSAYIVYTKTSHFNGFQTSPIQAGVGFQRHGMSKTFIRFDSKKRQD 230
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.399e-27 Identity = 68/183 (37.16%), Postives = 106/183 (57.92%), Query Frame = 1 Query: 94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLCH-PFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIY-WSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQA 636 LPE C++ + S T P DAC A+ SDI+W+KFLP+D+ +++ S FSSKKEL+ LC+ P LI+ GK+S LEK+SGK+ +LSA A++++ ++ + W+ ESRF VA LR + E ++ T++LS T Y Y++ K +D G + E + I G ++ Sbjct: 27 LPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPS---RVFSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFKKADNWCGFKGVSIEAVVGIVGEES 206
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25 Identity = 67/185 (36.22%), Postives = 100/185 (54.05%), Query Frame = 1 Query: 94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLC-HPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSE-VAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASK 642 LPEEC++ + S T P DAC A+ SDI+W+KF+P ++ ++S+S FSSKKELF LC LI+ K +EK++GK+ +LSA AL++ S W W++ S + E V L T+ W EI + T+ LS T Y Y++ +D YG A E + + G + S+ Sbjct: 43 LPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRSQH---FSSKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNL---STHHTWKWITNPVSAWLETVPELLTTRWFEIRCRTNTRFLSPRTRYSVYIVFLKADICYGFAYVAMEAVVRMVGHELSE 221
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: PP2B3_ARATH (F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17 Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 85 FNVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLCH-PFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNP 417 F+ LPE C++ + S T P DAC A+ SD +W+KFLP D+ +V +S F SKKEL LC P LI+ GK SF L+K+SG+K +LS + + I+W ++P Sbjct: 13 FDGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPES---RVFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSP 121
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16 Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFS-SKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIK 513 +PE CVA VF P + C A SD +W+K LP ++ +++ S SKK++FA+L P D +++ +G+ +SAR +SIT + YW+W+ +ESRF VA L+ W E++G ++ Sbjct: 24 IPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGTVR 164
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16 Identity = 50/153 (32.68%), Postives = 70/153 (45.75%), Query Frame = 1 Query: 79 CYFNVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSK--------SVSPLAFSSKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIK 513 C +PE C+ +F P + C A SD +W+ LPS++ +V + V KKE++A LC P L D G L+K SGK +S +A+ IT + YW +S ESRF + LR WLE GKI+ Sbjct: 19 CGLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRRYWEHISSDESRFGSITYLRQIWWLEAVGKIR 171
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 1 Query: 94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSS--KKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLS 528 LPE CVA + + P + CR A +D IW+ LP+++ I K + + KK+L+A L P L D G ++K++G+ +S++AL IT + YWS + ESRF A ++ W E+ G+ + + S Sbjct: 28 LPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDESRFQSAAYVQQIWWFEVGGEFEIQFPS 174
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12 Identity = 41/140 (29.29%), Postives = 68/140 (48.57%), Query Frame = 1 Query: 94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFS-SKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKI 510 LPE CVA + P++ CR A +D +W+ LP D+ I+ K + + K+++F L D G ++K +G SA+ LSIT + YWS + +SRF+ VA ++ W +++G+I Sbjct: 29 LPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEI 168
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12 Identity = 42/140 (30.00%), Postives = 68/140 (48.57%), Query Frame = 1 Query: 94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFS-SKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKI 510 LPE CVA + P++ CR A +D +W+ LP ++ +++ K + + K+ L+A L D ++K + +SA+ LSIT + YWS + ESRFS VA L+ W E++G+I Sbjct: 31 LPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILGGFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIPTDESRFSSVAYLQQIWWFEVDGEI 170 The following BLAST results are available for this feature:
BLAST of CK934264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934264 ID=CK934264; Name=CK934264; organism=Citrus sinensis; type=EST; length=740bpback to top |