CK934265

Overview
NameCK934265
Unique NameCK934265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27
Identity = 76/170 (44.71%), Postives = 101/170 (59.41%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSR---EIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R ++++++I+N   RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E  S+ +   + +YN    N    N  +L      S Y  +SR   ++    R  R M GEDL  L+I+ELQ LE  LE  LS+  Q K   +M ++  L RK  +L E NK LK
Sbjct:    1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSN-SALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLK 169          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27
Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +IIFS  GKL+E SSSSS+   + RY     ++   +  +   Q    +   L+R+I       R+M GE L   +IEELQ LE  L++ L ++   K   +  E   L+ K   L+ ENK L
Sbjct:    1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKML 167          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27
Identity = 71/167 (42.51%), Postives = 97/167 (58.08%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R ++++++I+N   RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E  S+ +   + RY     N    N+   E Q    +   L  +     R  R + GEDL  L+++ELQ LE  LE  LS+  Q K   +M ++  L RK  +L E N+ LK
Sbjct:    1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLK 167          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27
Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R  +++R+I+N   RQVTFSKRR GL KKA E+SVLCDA+V +I+FS  GKL+E SS SSM+ I+ RY  +S +   +  P+ E Q EN   +Y  L  ++    +  RQ+ GE L  LTI+ELQ LE  LE  L  +   K   +   IS L++K   L  +N  L+
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ 169          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27
Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R  +++R+I+N   RQVTFSKRR GL KKA E+SVLCDA+V +I+FS  GKL+E SS SSM+ I+ RY  +S +   +  P+ E Q EN   +Y  L  ++    +  RQ+ GE L  LTI+ELQ LE  LE  L  +   K   +   IS L++K   L  +N  L+
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ 169          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.682e-27
Identity = 72/168 (42.86%), Postives = 101/168 (60.12%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMH-SSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R KI+I++I+N  +RQVTFSKRR GL KKA ELSVLCDAEV VI+FS +GKLFE SS+ MK  ++RY  H SS+ SK      E+ +       L  +++    +  Q++G+ L+ LT +ELQ LE  L   L  V + K   + N++     K  +   EN+ L+
Sbjct:    1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRYGNHQSSSASKAEEDCAEVDI-------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLR 161          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.115e-27
Identity = 69/170 (40.59%), Postives = 106/170 (62.35%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSL---ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS  G+L+E +++S++  I RY    S+   +N P++     Q    +   L R+I D     R + GE L  L  +EL++LE+ LE+G+SRV   K + ++ EI  ++++  +L  +N  L+
Sbjct:   16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSD--AVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLR 183          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.115e-27
Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSL---ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS  G+L+E +++S++  I RY    S+   +N PS+     Q    +   L R+I D     R + GE L  L  +EL++LE  LE+G+SRV   K + ++ EI  ++++  +L   N  L+
Sbjct:   16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSD--AVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLR 183          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27
Identity = 67/170 (39.41%), Postives = 113/170 (66.47%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSK--YLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R + ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS  G+L+E +S+ S++  I RY  ++ +   +N+ +++  ++  K   L L++++       R++ GE+L G +IEEL+ LE  LE+ L ++   K + +  +I+ L+ K   LL++N+NL+
Sbjct:    1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD--HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27
Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENS---KYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R K+++++I+N   RQVTFSKRR GL KKA E+SVLCDAEV  I+FS  GKL+E ++ S M  I+ RY  +S     L   S E + E +   +Y  L  +I    +  + + GEDL  L ++ELQ LE  LE  L  ++  K   ++  IS L++K   L EENK L+
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKAL--ISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQ 169          
The following BLAST results are available for this feature:
BLAST of CK934265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MAD17_ORYSJ2.102e-2744.71MADS-box transcription factor 17 OS=Oryza sativa s... [more]
AGL14_ARATH2.102e-2743.11Agamous-like MADS-box protein AGL14 OS=Arabidopsis... [more]
MADS6_ORYSJ2.745e-2742.51MADS-box transcription factor 6 OS=Oryza sativa su... [more]
MAD18_ORYSJ3.585e-2743.53MADS-box transcription factor 18 OS=Oryza sativa s... [more]
MAD18_ORYSI3.585e-2743.53MADS-box transcription factor 18 OS=Oryza sativa s... [more]
AGL15_ARATH4.682e-2742.86Agamous-like MADS-box protein AGL15 OS=Arabidopsis... [more]
AGL5_ARATH6.115e-2740.59Agamous-like MADS-box protein AGL5 OS=Arabidopsis ... [more]
AGL1_ARATH6.115e-2741.18Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
MAD56_ORYSJ7.987e-2739.41MADS-box transcription factor 56 OS=Oryza sativa s... [more]
MAD15_ORYSJ7.987e-2742.11MADS-box transcription factor 15 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934265 ID=CK934265; Name=CK934265; organism=Citrus sinensis; type=EST; length=681bp
GCGGGGAAAAATAAAGAAAAAGAAATTGAANNNACTGTTTTGCTATAAAA
GGGAAGGCAACCTTTCCTTTCTCGAACACACAATCCAAGTCTGTCTCTCC
GTCTCTATTTCTTCTCACTTTCTGTAATTGGTGGCTTTAGGTTACTGTGA
TCAGTCCTGAACCAGGCCTCCTATTAGATTATGGCGAGAGAGAAGATCAA
GATCAGGAAGATTGATAACATAACAGCGAGACAAGTGACTTTCTCAAAGA
GAAGACGAGGCCTTTTCAAGAAAGCAGAAGAGCTTTCTGTTCTTTGTGAT
GCTGAGGTTGGAGTCATCATTTTCTCTGCTACTGGCAAGCTCTTTGAGTC
CTCCAGCTCCAGCATGAAGGACATAATTGCAAGGTACAACATGCATTCAA
GTAACATCAGCAAATTGAATCATCCATCTCTTGAACTGCAGTTGGAGAAT
AGCAAGTATCTCAGTTTGAGCAGGGAAATTGCTGATAAGAGCCGTCAACT
AAGGCAGATGAGAGGAGAGGATCTTCATGGATTGACTATTGAGGAACTCC
AGCACCTTGAAACAATGCTTGAACAGGGACTTAGCCGTGTGCTCCAGACA
AAGGGTGACCGGATTATGAATGAGATCTCTACACTTGAAAGGAAGGGAGC
TAAGCTGCTGGAGGAGAACAAGAATCTAAAG
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