CK934265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27 Identity = 76/170 (44.71%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSR---EIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R ++++++I+N RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E S+ + + +YN N N +L S Y +SR ++ R R M GEDL L+I+ELQ LE LE LS+ Q K +M ++ L RK +L E NK LK Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSN-SALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLK 169
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27 Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678 M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +IIFS GKL+E SSSSS+ + RY ++ + + Q + L+R+I R+M GE L +IEELQ LE L++ L ++ K + E L+ K L+ ENK L Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKML 167
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 71/167 (42.51%), Postives = 97/167 (58.08%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R ++++++I+N RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E S+ + + RY N N+ E Q + L + R R + GEDL L+++ELQ LE LE LS+ Q K +M ++ L RK +L E N+ LK Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLK 167
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27 Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R +++R+I+N RQVTFSKRR GL KKA E+SVLCDA+V +I+FS GKL+E SS SSM+ I+ RY +S + + P+ E Q EN +Y L ++ + RQ+ GE L LTI+ELQ LE LE L + K + IS L++K L +N L+ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ 169
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27 Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R +++R+I+N RQVTFSKRR GL KKA E+SVLCDA+V +I+FS GKL+E SS SSM+ I+ RY +S + + P+ E Q EN +Y L ++ + RQ+ GE L LTI+ELQ LE LE L + K + IS L++K L +N L+ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ 169
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.682e-27 Identity = 72/168 (42.86%), Postives = 101/168 (60.12%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMH-SSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R KI+I++I+N +RQVTFSKRR GL KKA ELSVLCDAEV VI+FS +GKLFE SS+ MK ++RY H SS+ SK E+ + L +++ + Q++G+ L+ LT +ELQ LE L L V + K + N++ K + EN+ L+ Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRYGNHQSSSASKAEEDCAEVDI-------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLR 161
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.115e-27 Identity = 69/170 (40.59%), Postives = 106/170 (62.35%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSL---ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS G+L+E +++S++ I RY S+ +N P++ Q + L R+I D R + GE L L +EL++LE+ LE+G+SRV K + ++ EI ++++ +L +N L+ Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSD--AVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLR 183
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.115e-27 Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSL---ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS G+L+E +++S++ I RY S+ +N PS+ Q + L R+I D R + GE L L +EL++LE LE+G+SRV K + ++ EI ++++ +L N L+ Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSD--AVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLR 183
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27 Identity = 67/170 (39.41%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSK--YLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R + ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS G+L+E +S+ S++ I RY ++ + +N+ +++ ++ K L L++++ R++ GE+L G +IEEL+ LE LE+ L ++ K + + +I+ L+ K LL++N+NL+ Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD--HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27 Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENS---KYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R K+++++I+N RQVTFSKRR GL KKA E+SVLCDAEV I+FS GKL+E ++ S M I+ RY +S L S E + E + +Y L +I + + + GEDL L ++ELQ LE LE L ++ K ++ IS L++K L EENK L+ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKAL--ISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQ 169 The following BLAST results are available for this feature:
BLAST of CK934265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934265 ID=CK934265; Name=CK934265; organism=Citrus sinensis; type=EST; length=681bpback to top |