CK934265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26 Identity = 69/171 (40.35%), Postives = 107/171 (62.57%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYN---MHSSNISKLNHPSLE-LQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E +++S+K I RY SSN ++ + + Q E SK L +I + Q R M GE L L++ +L++LE +E+G+S++ K + + EI ++++ L N+ L+ Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASK---LRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLR 184
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26 Identity = 66/168 (39.29%), Postives = 102/168 (60.71%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPS-LELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +++FS G+L+E +++S+K I RY S+ S S Q + L +I + Q R M GE L G+ ++EL++LE +E+G+S++ K + + EI ++++ L N+ L+ Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLR 184
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26 Identity = 70/168 (41.67%), Postives = 102/168 (60.71%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKY--LSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678 M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +IIFS GKL+E +SS+M+D I RY H+ + P E +++ KY ++ ++I R++ GE + +IEELQ +E LE+ + + K +I L++K L EN+ L Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKD-RVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKL 167
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26 Identity = 67/170 (39.41%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSK--YLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R + ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS G+L+E +S+ S++ I RY ++ + +N+ +++ ++ K L L++++ R++ GE+L G +IEEL+ LE LE+ L + K + + +I+ L+ K LL++N+NL+ Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD--HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLR 168
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26 Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E S+ SM + +Y S + N S +L+ ++YL L + + R R + GEDL L I+EL+ LE L+ L V T+ ++++++ L+RK + E N+ L+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26 Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E S+ SM + +Y S + N S +L+ ++YL L + + R R + GEDL L I+EL+ LE L+ L V T+ ++++++ L+RK + E N+ L+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26 Identity = 68/166 (40.96%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEEN 669 M R KI+I++I+N T RQVTFSKRR GL KKA EL+VLCDA VGV+IFS+TGK+FE S + S++++I +Y + +S+ ++NH ++ LE ++ + E+ +R+ G+DL LT++++ LE LE +S+V K + ++ L RK L ++N Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQ-QILLEMTR---MKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQN 162
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26 Identity = 67/168 (39.88%), Postives = 104/168 (61.90%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R K+++++I+N +RQVTF+KRR GL KKA ELS+LCDAEV +IIFS G+LFE SSSS M + RY S N + + + E ++ +YL L + R + GEDL L+++EL+ LE +E L ++ K +++++ L+ K +L + NK+L+ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY--RSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLR 166
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26 Identity = 67/168 (39.88%), Postives = 104/168 (61.90%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R K+++++I+N +RQVTF+KRR GL KKA ELS+LCDAEV +IIFS G+LFE SSSS M + RY S N + + + E ++ +YL L + R + GEDL L+++EL+ LE +E L ++ K +++++ L+ K +L + NK+L+ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY--RSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLR 166
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26 Identity = 70/169 (41.42%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLE-NSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R K+++++I+N RQVTFSKRR GL KKA E+SVLCDAEV +IIFS GKL+E ++ S M I+ RY +S L + Q +Y L ++ + + + GEDL L ++ELQ LE LE L + K ++ I+ L+RK L EENK L+ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQ 169 The following BLAST results are available for this feature:
BLAST of CK934265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934265 ID=CK934265; Name=CK934265; organism=Citrus sinensis; type=EST; length=681bpback to top |