CK934265

Overview
NameCK934265
Unique NameCK934265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26
Identity = 69/171 (40.35%), Postives = 107/171 (62.57%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYN---MHSSNISKLNHPSLE-LQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E +++S+K  I RY      SSN   ++  + +  Q E SK   L  +I +   Q R M GE L  L++ +L++LE  +E+G+S++   K + +  EI  ++++   L   N+ L+
Sbjct:   17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASK---LRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLR 184          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26
Identity = 66/168 (39.29%), Postives = 102/168 (60.71%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPS-LELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +++FS  G+L+E +++S+K  I RY    S+ S     S    Q    +   L  +I +   Q R M GE L G+ ++EL++LE  +E+G+S++   K + +  EI  ++++   L   N+ L+
Sbjct:   17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLR 184          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 70/168 (41.67%), Postives = 102/168 (60.71%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKY--LSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +IIFS  GKL+E +SS+M+D I RY  H+ +      P  E  +++ KY   ++ ++I       R++ GE +   +IEELQ +E  LE+ +  +   K      +I  L++K   L  EN+ L
Sbjct:    1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKD-RVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKL 167          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 67/170 (39.41%), Postives = 112/170 (65.88%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSK--YLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R + ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS  G+L+E +S+ S++  I RY  ++ +   +N+ +++  ++  K   L L++++       R++ GE+L G +IEEL+ LE  LE+ L  +   K + +  +I+ L+ K   LL++N+NL+
Sbjct:    1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD--HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLR 168          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26
Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R ++++++I+N   RQVTF+KRR GL KKA ELSVLCDAEV +IIFS  GKL+E  S+ SM   + +Y   S      +  N  S +L+   ++YL L   + +  R  R + GEDL  L I+EL+ LE  L+  L  V  T+   ++++++ L+RK   + E N+ L+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26
Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R ++++++I+N   RQVTF+KRR GL KKA ELSVLCDAEV +IIFS  GKL+E  S+ SM   + +Y   S      +  N  S +L+   ++YL L   + +  R  R + GEDL  L I+EL+ LE  L+  L  V  T+   ++++++ L+RK   + E N+ L+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26
Identity = 68/166 (40.96%), Postives = 107/166 (64.46%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEEN 669
            M R KI+I++I+N T RQVTFSKRR GL KKA EL+VLCDA VGV+IFS+TGK+FE  S + S++++I +Y +  +S+  ++NH   ++ LE ++   +  E+      +R+  G+DL  LT++++  LE  LE  +S+V   K   +  ++  L RK   L ++N
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQ-QILLEMTR---MKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQN 162          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 67/168 (39.88%), Postives = 104/168 (61.90%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R K+++++I+N  +RQVTF+KRR GL KKA ELS+LCDAEV +IIFS  G+LFE SSSS M   + RY   S N +  +  + E ++   +YL L   +       R + GEDL  L+++EL+ LE  +E  L ++   K   +++++  L+ K  +L + NK+L+
Sbjct:    1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY--RSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLR 166          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 67/168 (39.88%), Postives = 104/168 (61.90%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R K+++++I+N  +RQVTF+KRR GL KKA ELS+LCDAEV +IIFS  G+LFE SSSS M   + RY   S N +  +  + E ++   +YL L   +       R + GEDL  L+++EL+ LE  +E  L ++   K   +++++  L+ K  +L + NK+L+
Sbjct:    1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY--RSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLR 166          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 70/169 (41.42%), Postives = 98/169 (57.99%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLE-NSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R K+++++I+N   RQVTFSKRR GL KKA E+SVLCDAEV +IIFS  GKL+E ++ S M  I+ RY  +S     L     + Q     +Y  L  ++    +  + + GEDL  L ++ELQ LE  LE  L  +   K   ++  I+ L+RK   L EENK L+
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQ 169          
The following BLAST results are available for this feature:
BLAST of CK934265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
AG_TOBAC1.362e-2640.35Floral homeotic protein AGAMOUS OS=Nicotiana tabac... [more]
AG_SOLLC1.362e-2639.29Floral homeotic protein AGAMOUS OS=Solanum lycoper... [more]
SOC1_ARATH1.779e-2641.67MADS-box protein SOC1 OS=Arabidopsis thaliana GN=S... [more]
MAD56_ORYSI1.779e-2639.41MADS-box transcription factor 56 OS=Oryza sativa s... [more]
MADS7_ORYSJ3.035e-2639.77MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI3.035e-2639.77MADS-box transcription factor 7 OS=Oryza sativa su... [more]
M17_MAIZE3.035e-2640.96MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=... [more]
MADS1_ORYSJ3.964e-2639.88MADS-box transcription factor 1 OS=Oryza sativa su... [more]
MADS1_ORYSI3.964e-2639.88MADS-box transcription factor 1 OS=Oryza sativa su... [more]
MAD14_ORYSJ3.964e-2641.42MADS-box transcription factor 14 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934265 ID=CK934265; Name=CK934265; organism=Citrus sinensis; type=EST; length=681bp
GCGGGGAAAAATAAAGAAAAAGAAATTGAANNNACTGTTTTGCTATAAAA
GGGAAGGCAACCTTTCCTTTCTCGAACACACAATCCAAGTCTGTCTCTCC
GTCTCTATTTCTTCTCACTTTCTGTAATTGGTGGCTTTAGGTTACTGTGA
TCAGTCCTGAACCAGGCCTCCTATTAGATTATGGCGAGAGAGAAGATCAA
GATCAGGAAGATTGATAACATAACAGCGAGACAAGTGACTTTCTCAAAGA
GAAGACGAGGCCTTTTCAAGAAAGCAGAAGAGCTTTCTGTTCTTTGTGAT
GCTGAGGTTGGAGTCATCATTTTCTCTGCTACTGGCAAGCTCTTTGAGTC
CTCCAGCTCCAGCATGAAGGACATAATTGCAAGGTACAACATGCATTCAA
GTAACATCAGCAAATTGAATCATCCATCTCTTGAACTGCAGTTGGAGAAT
AGCAAGTATCTCAGTTTGAGCAGGGAAATTGCTGATAAGAGCCGTCAACT
AAGGCAGATGAGAGGAGAGGATCTTCATGGATTGACTATTGAGGAACTCC
AGCACCTTGAAACAATGCTTGAACAGGGACTTAGCCGTGTGCTCCAGACA
AAGGGTGACCGGATTATGAATGAGATCTCTACACTTGAAAGGAAGGGAGC
TAAGCTGCTGGAGGAGAACAAGAATCTAAAG
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