CK934265

Overview
NameCK934265
Unique NameCK934265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 66/169 (39.05%), Postives = 106/169 (62.72%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R KI+I++I+N T RQVTFSKRR GL KKA EL+VLCDA VGV+IFS+TGK+FE  S + S++++I  Y  + +++  ++NH   ++ +E ++   +  E+      +R+  G+DL  LT+ ++  LE  LE  +++V   K   +  ++  L RK   L ++N  L
Sbjct:    1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQ-QIFVEMTR---MRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFL 165          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 63/171 (36.84%), Postives = 109/171 (63.74%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLEL---QLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R +I+I++I+N T+RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E S+++++K  I RY    +  S    P +E+   Q    +   L  +I       + + G+++  L+++EL+ LE+ LE+G+S++   K + + +EI+ + ++  +L  +N +L+
Sbjct:    1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLR 171          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 70/171 (40.94%), Postives = 102/171 (59.65%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSL-ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R ++++++I+N   RQVTFSKRR GL KKA E+SVLCDAEVG+I+FS  GKLFE ++ S M+ ++ RY  +S     +   +H S     LEN+K L    E+  ++ +L    GEDL  L ++ELQ+LE  L   L  +   K   +   IS L+++   L E+N  L
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAK-LKARLEVLQRNEKL--YVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQL 168          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 69/171 (40.35%), Postives = 104/171 (60.82%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKL----NHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R ++++++I+N   RQVTFSKRR GL KKA E+SVLCDAEV +I+FS+ GKLFE S+ S M+ I+ RY+ +  +  +L       S    LE++K L    E+ +K++  R   GEDL  L+++ELQ LE  L+  +  +   K   +   IS L++K   L + N +L
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAK-LKARVEVLEKNK--RNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSL 168          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24
Identity = 70/169 (41.42%), Postives = 102/169 (60.36%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYNMHSSNIS-KLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R KI+I++I+N T RQVTFSKRR G+ KKA E+SVLCDAEVGV+IFS+ GKL++  S  +S+  I+ +Y  +S  I     H SL  +++  K     +E  +   +LR ++GEDL+ L  +EL  +E  L+ G+  V     D++M+      R    L +ENK L
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIK-----KENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLL 160          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24
Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLE-LQLENS---KYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R ++++++++N   RQVTF+KRR GL KKA ELSVLCDAEV +I+FS  GKL+E  S+SSM   + RY   +    + N  S E L LE S   +YL L        R  R + GEDL  L+ ++L+ LE  L+  L ++  T+   +++++  L+RK   L E N+ L+
Sbjct:    1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALR 172          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24
Identity = 72/172 (41.86%), Postives = 103/172 (59.88%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLE-LQLENS---KYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R ++++++I+N   RQVTF+KRR GL KKA ELSVLCDAEV +IIFS  GKL+E  SSSSM   + RY   +    + N PS E L +E S   +YL L        R  R + GEDL  L+ +EL+ LE  L+  L ++   +   ++++++ L+ K   L E NK L+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLR 172          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24
Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSL-ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R ++++++I+N   RQVTFSKRR GL KKA E+SVLCDAEVG+I+FS  GKLFE ++ S M+ ++ RY  +S     +   +H S     LE++K   L   +    R  +   GEDL  L ++ELQ+LE  L+  L  +   K   +   IS L+++   L E+N  L
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAK---LKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQL 168          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 65/169 (38.46%), Postives = 103/169 (60.95%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLS--LSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS  GKL+E +S+S +  I RY  ++     + + +++  +E  K  +  L++++       R++ GE L   +IEEL  LE  LE+ L  +   K   +  +++ L  K  KL ++N+ L+
Sbjct:    1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTK--ENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELR 167          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 68/170 (40.00%), Postives = 105/170 (61.76%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQ----LENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKN 675
            M R ++++++I+N   RQVTFSKRR GL KKA E+SVLCDAEV ++IFS+ GKLFE S+ S M+ I+ RY+ +  +  +L    +       LE++K L    E+ +K++  R   GEDL  L+++ELQ LE  L   +  +   K   +   IS L++K  K+L+++ N
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAK-LKARVEVLEKNK--RNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKD-KVLQDHNN 166          
The following BLAST results are available for this feature:
BLAST of CK934265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MAD29_ORYSJ1.275e-2439.05MADS-box transcription factor 29 OS=Oryza sativa s... [more]
MAD13_ORYSJ1.275e-2436.84MADS-box transcription factor 13 OS=Oryza sativa s... [more]
AGL8_SOLCO1.275e-2440.94Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL8_ARATH1.275e-2440.35Agamous-like MADS-box protein AGL8 OS=Arabidopsis ... [more]
MADS2_ORYSJ2.175e-2441.42MADS-box transcription factor 2 OS=Oryza sativa su... [more]
MTF1_PEA2.841e-2440.12MADS-box transcription factor 1 OS=Pisum sativum G... [more]
AGL9_SINAL2.841e-2441.86Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL8_SOLTU2.841e-2439.77Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
MAD50_ORYSJ3.710e-2438.46MADS-box transcription factor 50 OS=Oryza sativa s... [more]
AGL8_SINAL3.710e-2440.00Agamous-like MADS-box protein AGL8 homolog OS=Sina... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934265 ID=CK934265; Name=CK934265; organism=Citrus sinensis; type=EST; length=681bp
GCGGGGAAAAATAAAGAAAAAGAAATTGAANNNACTGTTTTGCTATAAAA
GGGAAGGCAACCTTTCCTTTCTCGAACACACAATCCAAGTCTGTCTCTCC
GTCTCTATTTCTTCTCACTTTCTGTAATTGGTGGCTTTAGGTTACTGTGA
TCAGTCCTGAACCAGGCCTCCTATTAGATTATGGCGAGAGAGAAGATCAA
GATCAGGAAGATTGATAACATAACAGCGAGACAAGTGACTTTCTCAAAGA
GAAGACGAGGCCTTTTCAAGAAAGCAGAAGAGCTTTCTGTTCTTTGTGAT
GCTGAGGTTGGAGTCATCATTTTCTCTGCTACTGGCAAGCTCTTTGAGTC
CTCCAGCTCCAGCATGAAGGACATAATTGCAAGGTACAACATGCATTCAA
GTAACATCAGCAAATTGAATCATCCATCTCTTGAACTGCAGTTGGAGAAT
AGCAAGTATCTCAGTTTGAGCAGGGAAATTGCTGATAAGAGCCGTCAACT
AAGGCAGATGAGAGGAGAGGATCTTCATGGATTGACTATTGAGGAACTCC
AGCACCTTGAAACAATGCTTGAACAGGGACTTAGCCGTGTGCTCCAGACA
AAGGGTGACCGGATTATGAATGAGATCTCTACACTTGAAAGGAAGGGAGC
TAAGCTGCTGGAGGAGAACAAGAATCTAAAG
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