CK934265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24 Identity = 66/169 (39.05%), Postives = 106/169 (62.72%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678 M R KI+I++I+N T RQVTFSKRR GL KKA EL+VLCDA VGV+IFS+TGK+FE S + S++++I Y + +++ ++NH ++ +E ++ + E+ +R+ G+DL LT+ ++ LE LE +++V K + ++ L RK L ++N L Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQ-QIFVEMTR---MRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFL 165
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24 Identity = 63/171 (36.84%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLEL---QLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R +I+I++I+N T+RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E S+++++K I RY + S P +E+ Q + L +I + + G+++ L+++EL+ LE+ LE+G+S++ K + + +EI+ + ++ +L +N +L+ Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLR 171
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24 Identity = 70/171 (40.94%), Postives = 102/171 (59.65%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSL-ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678 M R ++++++I+N RQVTFSKRR GL KKA E+SVLCDAEVG+I+FS GKLFE ++ S M+ ++ RY +S + +H S LEN+K L E+ ++ +L GEDL L ++ELQ+LE L L + K + IS L+++ L E+N L Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAK-LKARLEVLQRNEKL--YVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQL 168
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24 Identity = 69/171 (40.35%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKL----NHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678 M R ++++++I+N RQVTFSKRR GL KKA E+SVLCDAEV +I+FS+ GKLFE S+ S M+ I+ RY+ + + +L S LE++K L E+ +K++ R GEDL L+++ELQ LE L+ + + K + IS L++K L + N +L Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAK-LKARVEVLEKNK--RNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSL 168
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24 Identity = 70/169 (41.42%), Postives = 102/169 (60.36%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYNMHSSNIS-KLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678 M R KI+I++I+N T RQVTFSKRR G+ KKA E+SVLCDAEVGV+IFS+ GKL++ S +S+ I+ +Y +S I H SL +++ K +E + +LR ++GEDL+ L +EL +E L+ G+ V D++M+ R L +ENK L Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIK-----KENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLL 160
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLE-LQLENS---KYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R ++++++++N RQVTF+KRR GL KKA ELSVLCDAEV +I+FS GKL+E S+SSM + RY + + N S E L LE S +YL L R R + GEDL L+ ++L+ LE L+ L ++ T+ +++++ L+RK L E N+ L+ Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALR 172
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 72/172 (41.86%), Postives = 103/172 (59.88%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLE-LQLENS---KYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E SSSSM + RY + + N PS E L +E S +YL L R R + GEDL L+ +EL+ LE L+ L ++ + ++++++ L+ K L E NK L+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLR 172
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSL-ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678 M R ++++++I+N RQVTFSKRR GL KKA E+SVLCDAEVG+I+FS GKLFE ++ S M+ ++ RY +S + +H S LE++K L + R + GEDL L ++ELQ+LE L+ L + K + IS L+++ L E+N L Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAK---LKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQL 168
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24 Identity = 65/169 (38.46%), Postives = 103/169 (60.95%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLS--LSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681 M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS GKL+E +S+S + I RY ++ + + +++ +E K + L++++ R++ GE L +IEEL LE LE+ L + K + +++ L K KL ++N+ L+ Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTK--ENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELR 167
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24 Identity = 68/170 (40.00%), Postives = 105/170 (61.76%), Query Frame = 1 Query: 181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQ----LENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKN 675 M R ++++++I+N RQVTFSKRR GL KKA E+SVLCDAEV ++IFS+ GKLFE S+ S M+ I+ RY+ + + +L + LE++K L E+ +K++ R GEDL L+++ELQ LE L + + K + IS L++K K+L+++ N Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAK-LKARVEVLEKNK--RNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKD-KVLQDHNN 166 The following BLAST results are available for this feature:
BLAST of CK934265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934265 ID=CK934265; Name=CK934265; organism=Citrus sinensis; type=EST; length=681bpback to top |