CK934265

Overview
NameCK934265
Unique NameCK934265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 67/169 (39.64%), Postives = 99/169 (58.58%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIAD-KSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R K+++R+I+N   RQVTF KRR GL KKA ELSVLCDA+VGVIIFS+ GKL E +++ +M +++ RY  + +   ++   +L+ Q    + + L RE  D   R LR   G     +T+++L  LE  LE  + ++  TK   +  EI  L  K   L E N+ L+
Sbjct:    1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAG-GQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQ 168          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 71/178 (39.89%), Postives = 103/178 (57.87%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARY------NMHSSNIS-----KLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            MAR KI++++I+N   RQVTF KRR GL KKA+ELSVLCDAE+GV+IFS  GKLFE ++  +M+ +I +Y         SS+ +     +L  P+L+ + E +    L +EI    + +  M G     + +EEL  LE  LE  +S++   K D ++ EI +L  K   L   NK L
Sbjct:    1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEIN---VLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYL 175          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYNMHSSNISKLNHPSLELQLEN-SKYLSLSREIADKSR-QLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 645
            M R KI+I++I+N T RQVT+SKRR G+ KKA EL+VLCDA+V +I+FS+TGK  E  S S+ +K I  RY         +       Q EN  + LS  ++I    R ++RQ  GEDL GL  +EL+ LE  ++  L  V   K   I  +  T ++K
Sbjct:    1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIE------QYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20
Identity = 67/174 (38.51%), Postives = 98/174 (56.32%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-------SSSSSMKDIIARYNMHSSNIS-KLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R KI+I++I+N T RQVTFSKRR G+ KKA E+ VLCDAEVGV+IFS+ GKL +       S    +  I+ +Y  +S  I     H SL  +++  K     +E  +   +LR M+GEDL+ L  +EL  +E  L  G + +     D++M+     +R    L +E+K L
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVK-----KENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANL----RDKMMDHWRMHKRNEKMLEDEHKML 165          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20
Identity = 62/170 (36.47%), Postives = 103/170 (60.59%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYN-MHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            M R KI+I++I+N + RQVT+SKRR G+ KKA+E+SVLCDA V VIIF+++GK+ E  S S+++ D++  Y+ +    +    H  L+ ++   K  + S +I     +LR ++GED+  L  +EL  LE  LE G S +     ++ M  +  + +    + EEN++L+
Sbjct:    1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQI-----ELRHLKGEDITTLNYKELMVLEDALENGTSAL----KNKQMEFVRMMRKHNEMVEEENQSLQ 161          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20
Identity = 58/167 (34.73%), Postives = 100/167 (59.88%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSS-SSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R+K++I++I+N ++RQVTFSKRR GL +KA +LS+LC++ + V++ S +GKL++S+S  +M  II RY +H ++       +L+L  +   YL L   +     +L +    ++   +++ L  LE  LE  LS     K + +M E+ +L++    L EEN+ L
Sbjct:    1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHAD----ELEALDLAEKTRNYLPLKELLEIVQSKLEE---SNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTL 160          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20
Identity = 63/169 (37.28%), Postives = 101/169 (59.76%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLH-GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            MAR K+++R+I+N   RQVTF KRR GL KKA ELS+LC+A++G+IIFSA GKL++ +++ +M+++I RY   S++  + N    +      + + L +EI    + LR + G   +  +T+EEL  LE  LE  +  +   K   ++ EI  L+ K   L   N+ L+
Sbjct:    1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK--SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQ 167          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20
Identity = 63/169 (37.28%), Postives = 101/169 (59.76%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLH-GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLK 681
            MAR K+++R+I+N   RQVTF KRR GL KKA ELS+LC+A++G+IIFSA GKL++ +++ +M+++I RY   S++  + N    +      + + L +EI    + LR + G   +  +T+EEL  LE  LE  +  +   K   ++ EI  L+ K   L   N+ L+
Sbjct:    1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK--SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQ 167          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20
Identity = 68/174 (39.08%), Postives = 102/174 (58.62%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY------NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            MAR KI+I++I+N T RQVT+SKRR GLFKKA ELSVLCDA+V +I+ S+T KL E  S +++ K +  +Y      ++ SS+  K+      L+  N    +L REI       RQ  GE L+ L  E++ +L   ++  L  + + K   I N+I T ++K   + E ++NL
Sbjct:    1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWSSHYEKMQE---HLKKLNEVNRNLRREI-------RQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNL 164          
BLAST of CK934265 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 64/168 (38.10%), Postives = 100/168 (59.52%), Query Frame = 1
Query:  181 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 678
            M R+K++I++I+N ++RQVTFSKRR GL +KA +LSVLCDA V +++ SA+GKL+  SS  ++  I+ RY   H+ ++  L+H S  L    S Y  L  E+ D      ++ G ++  ++I+ L  LE  LE  LS     K + ++  +  L+ K   L EEN+ L
Sbjct:    1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKALDHQSKALNY-GSHYELL--ELVDS-----KLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVL 160          
The following BLAST results are available for this feature:
BLAST of CK934265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MAD33_ORYSJ2.940e-2139.64MADS-box transcription factor 33 OS=Oryza sativa s... [more]
AGL12_ARATH2.940e-2139.89Agamous-like MADS-box protein AGL12 OS=Arabidopsis... [more]
MAD16_ORYSJ6.549e-2141.51MADS-box transcription factor 16 OS=Oryza sativa s... [more]
MADS4_ORYSJ1.117e-2038.51MADS-box transcription factor 4 OS=Oryza sativa su... [more]
GLOB_ANTMA1.117e-2036.47Floral homeotic protein GLOBOSA OS=Antirrhinum maj... [more]
AGL31_ARATH1.117e-2034.73Agamous-like MADS-box protein AGL31 OS=Arabidopsis... [more]
MAD26_ORYSJ1.459e-2037.28MADS-box transcription factor 26 OS=Oryza sativa s... [more]
MAD26_ORYSI1.459e-2037.28MADS-box transcription factor 26 OS=Oryza sativa s... [more]
DEFA_ANTMA1.459e-2039.08Floral homeotic protein DEFICIENS OS=Antirrhinum m... [more]
FLC_ARATH1.905e-2038.10MADS-box protein FLOWERING LOCUS C OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934265 ID=CK934265; Name=CK934265; organism=Citrus sinensis; type=EST; length=681bp
GCGGGGAAAAATAAAGAAAAAGAAATTGAANNNACTGTTTTGCTATAAAA
GGGAAGGCAACCTTTCCTTTCTCGAACACACAATCCAAGTCTGTCTCTCC
GTCTCTATTTCTTCTCACTTTCTGTAATTGGTGGCTTTAGGTTACTGTGA
TCAGTCCTGAACCAGGCCTCCTATTAGATTATGGCGAGAGAGAAGATCAA
GATCAGGAAGATTGATAACATAACAGCGAGACAAGTGACTTTCTCAAAGA
GAAGACGAGGCCTTTTCAAGAAAGCAGAAGAGCTTTCTGTTCTTTGTGAT
GCTGAGGTTGGAGTCATCATTTTCTCTGCTACTGGCAAGCTCTTTGAGTC
CTCCAGCTCCAGCATGAAGGACATAATTGCAAGGTACAACATGCATTCAA
GTAACATCAGCAAATTGAATCATCCATCTCTTGAACTGCAGTTGGAGAAT
AGCAAGTATCTCAGTTTGAGCAGGGAAATTGCTGATAAGAGCCGTCAACT
AAGGCAGATGAGAGGAGAGGATCTTCATGGATTGACTATTGAGGAACTCC
AGCACCTTGAAACAATGCTTGAACAGGGACTTAGCCGTGTGCTCCAGACA
AAGGGTGACCGGATTATGAATGAGATCTCTACACTTGAAAGGAAGGGAGC
TAAGCTGCTGGAGGAGAACAAGAATCTAAAG
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