CK934266

Overview
NameCK934266
Unique NameCK934266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length437
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.657e-14
Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 238
            VKES+ +L K LD+YE +L++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+W K LE
Sbjct:  133 VKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 1.498e-12
Identity = 40/81 (49.38%), Postives = 49/81 (60.49%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 247
            V E+ EKL K L+VYE RL+K KYLAGDF SLADL+H+  T  L        ++    HV AWW  +  RPS +KV  L K
Sbjct:  132 VDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFA-TPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.338e-12
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 235
            V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W  +I+ RP+ +KVL
Sbjct:  137 VAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKK-LFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.268e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 232
            V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W  +I+ RP+ +KV
Sbjct:  137 VAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKK-LFTERPRVNEWVAEITKRPASEKV 211          
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.826e-11
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTPF 256
            V ES E+L   L +YE RL KS+YLAGD  + ADL+HIPFT Y +  P  +  +  D   V AWW+ +  RP+ ++V +   T F
Sbjct:  141 VDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAK--VFDDYPKVKAWWEMLMARPAVQRVCKHMPTEF 223          
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.690e-11
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTPF 256
            V ES E+L   L +YE RL KS+YLAGD  S ADL+HIPFT Y +  P  +  +  +   V AWW+ +  RP+ ++V +   T F
Sbjct:  141 VDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAK--VFDEYPKVKAWWEMLMARPAVQRVCKHMPTEF 223          
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 66.6254 bits (161), Expect = 4.820e-11
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTP 253
            V++  E+L K LDVYE  L+++KYLAGD F+LAD +H            R   +  R HV AWW+ I+ RP+++K +     P
Sbjct:  133 VEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAIPLP 215          
BLAST of CK934266 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 8.221e-11
Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 2
Query:    5 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 238
            V E+ EKL K L+VYE RL+   YLAGDF SLADLS     H L+       ++    HVSAWW  ++ RP+  KV +
Sbjct:  134 VDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMA-TEYAALVHALPHVSAWWQGLAARPAANKVAQ 210          
The following BLAST results are available for this feature:
BLAST of CK934266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTF1_TOBAC4.657e-1450.00Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF1_MAIZE1.498e-1249.38Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GST16_ARATH3.338e-1246.75Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH1.268e-1146.05Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF1_WHEAT2.826e-1143.53Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT3.690e-1143.53Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF3_MAIZE4.820e-1139.76Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF4_MAIZE8.221e-1146.15Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934266 ID=CK934266; Name=CK934266; organism=Citrus sinensis; type=EST; length=437bp
GGGGGTGAAGGAGAGTGACGAAAAGCTTGGAAAAACGCTCGACGTTTACG
AGGAGAGGCTGTCGAAGAGCAAGTATTTGGCTGGTGATTTCTTCAGCCTG
GCTGATCTGAGTCACATTCCATTTACCCACTACTTGGTTGGGCCGATGGG
GAGACAGCATATGATTAGAGACAGGAAGCATGTGAGTGCCTGGTGGGATG
ATATTAGCAACAGGCCGTCCTGGAAGAAAGTCCTTGAGCTCTGTAAGACT
CCTTTCGGCTGAGCTTGATTGTATGTGTTTCAATTTTCGGGCTTGTGTTT
TACTTCTCTACTACTTGGTTTGTTTCTGTCTGTGGGATATGTTTCTTGCA
TATGTGTGTTTCAAATAAATAAATGTTTGGAGTTGGAGCTTTTTTTTAAA
AAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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