CK934267

Overview
NameCK934267
Unique NameCK934267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:137..1012. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934267 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 50/242 (20.66%), Postives = 101/242 (41.74%), Query Frame = 3
Query:  147 NLYHLKPVRYRLFAEWAQTYGPIMSVWFGSTLNVVISSSELAKQVLKENDQQXXXXXXXXXXXXXXXXGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTP---WLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALL 863
            NL+ L P  +R     +  YGP+M + FG    +V+S  ++   ++K +D +                G+D+I+  YG  +  ++ +            +   +RE+E+  M E +            ++ L   L  ++ + I R+ LG+++   EG     GI+ K+++    +        ++ P   W+ W+  + ++K    N + D    +++ EH  A  K        F+D LL
Sbjct:   45 NLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKL----EEASSSSSSVNLSKLLMTLTNDIICRITLGRKYNEEEG-----GIDIKNLVMTSSEFFGKFFFGDFIPSLAWIDWISGI-DDKMKDINNKLDCFLDSMVQEHVDADHK----EPSDFIDMLL 272          
BLAST of CK934267 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 57/245 (23.27%), Postives = 110/245 (44.90%), Query Frame = 3
Query:  147 NLYHLKPVRYRLFAEWAQTYGPIMSVWFGSTLNVVISSSELAKQVLKENDQQXXXXXXXXXXXXXXXXGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFR-DCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPE--GVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLN 866
            NL+ L    +R     +  YGP+M + FG    +V+SSSE A ++LK +D +                G+D+++  YG ++ +++ V            +   +RE+EV AM+E + +  C++  +      L +    ++ +  +R+ LGK++   E  G L ++  +  ++L           + +Y P L W+  +     K V+ +     L + ++ EH  A     G  K  FV+ LL+
Sbjct:   45 NLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAE-----NLSELFVTLTSDVTSRVSLGKKYWEDETAGGLKKRVRQIMELL-------REFPIGDYVPALAWIDRINGFNSKIVEVSRAYSDLMEKVVQEHLEA-----GEHKADFVNILLS 272          
The following BLAST results are available for this feature:
BLAST of CK934267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
C71AR_ARATH7.131e-1120.66Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH9.313e-1123.27Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934267 ID=CK934267; Name=CK934267; organism=Citrus sinensis; type=EST; length=876bp
GGGGATGTTCTTTCTCATATCAAACAACAATTATGGCTCTTCACGTTCTC
TTCCTCACAATATTCTTCATCTTCCTGTCCTACAAGCTTTACCAAAAGCT
CAGACTGAAGCTACCACCAGGGCCACGGCCATGGCCCGTCGTGGGAAACC
TCTACCACTTAAAACCTGTCCGATATCGGTTGTTTGCCGAGTGGGCTCAG
ACTTACGGGCCTATAATGTCCGTTTGGTTCGGTTCCACTTTAAACGTCGT
TATTTCGAGCTCGGAGTTGGCCAAGCAAGTTCTTAAAGAAAATGATCAAC
AATTATCAAATAGGCGCAGAAGTAGAGCAGCTCTTAGGCTTTCTAGAAAT
GGAAAAGACCTTATTTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAG
AAAAGTTTCTACTCTTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTA
GGCCAATTAGGGAAGATGAAGTCACTGCCATGGTTGAATCCATCTTTAGA
GACTGCACTAACCCAGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTA
CTTGTCAGCAGTATCATTCAACAACATTACAAGACTTGTTCTTGGAAAGC
GATTTATGAGCCCAGAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAG
GACATCCTTGGAAATGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGA
ATACACTCCATGGCTAAGATGGATGTTTCCACTAGAGGAAGAGAAATATG
TGAAGCACAATGAACGCAGAGATAAGCTTACGAAAACCATAATGGCAGAA
CATACCCTTGCTCGTCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGT
TGATGCGTTGCTCAATTTTGCAGAGG
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