CK934269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11 Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 89 DVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 D + +V L+WA T L +AF+ + +K+I DR +GRS GFGFITF ++M A++ MN L+GR + +N A Sbjct: 214 DSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 101 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GF+T D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 101 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GF+T D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 101 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GF+T D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 101 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GF+T D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 101 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GF+T D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: HNRGT_HUMAN (RNA-binding motif protein, X-linked-like-2 OS=Homo sapiens GN=RBMXL2 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11 Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 M AD + F+GGL T + +L F YG I+E ++ DRET +S GF F+TF + A MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQA 84
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RBY1B_MOUSE (RNA-binding motif protein, Y chromosome, family 1 member B OS=Mus musculus GN=Rbmy1b PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.891e-11 Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 331 MA D + F+GGL T +L E F +G + ++ DRET +S GF F+TFR ++A++ MNG LDG+ I V +A+ Sbjct: 1 MAETDQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEMNGVILDGKRIKVKQAR 85
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.891e-11 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 101 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+S G+GF+T D + A + N +DGR VN A Sbjct: 35 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 109
BLAST of CK934269 vs. ExPASy Swiss-Prot
Match: RBM38_XENTR (RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 101 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSTGFGFITFRDEKSMRDAIEGMNGQNLDGRNITVNEA 328 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+S G+GF+T D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAERACKDPN-PIIDGRKANVNLA 86 The following BLAST results are available for this feature:
BLAST of CK934269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934269 ID=CK934269; Name=CK934269; organism=Citrus sinensis; type=EST; length=585bpback to top |