CK934275

Overview
NameCK934275
Unique NameCK934275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934275_ssr112 microsatellite CK934275_ssr112:112..121. BLAST: Citrus ESTs to Prunus persica proteins V1
CK934275_ssr122 microsatellite CK934275_ssr122:122..131. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1656 contig Csv1_Contig1656:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 5.200e-59
Identity = 113/214 (52.80%), Postives = 154/214 (71.96%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYG-VLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +TLG GSF KVK A+++ TG  VAIKI++R ++   KM E+I+REI  MKL +HP++IK+ EV+ + T I++V+E++ GGELF+ I K+G+L EDE+RR FQQ+I+ VDYCH   V HRDLKPENLLLD     +KI+DFGLS + Q   +   L T+CG+PNY APEV++ K Y G   DVWSCGVIL+  +   LPFD+ ++  L
Sbjct:   28 IGNYRLDKTLGIGSFGKVKLAEHIRTGVKVAIKILNRTKIKNLKMDEKIRREIQNMKLFRHPHIIKLYEVIETTTDIFMVMEYVTGGELFEYIVKNGKLLEDESRRLFQQMISGVDYCHHHMVVHRDLKPENLLLDPINKCIKIADFGLSNMMQ---DGDFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYAFLCAKLPFDDESIPML 238          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 5.200e-59
Identity = 108/216 (50.00%), Postives = 156/216 (72.22%), Query Frame = 3
Query:  210 RTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R ++G Y LG TLG G+F KVK  ++  TG  VA+KI++R ++    +V +IKREI  +KL +HP++IK+ +V+++ T  ++V+E++ GGELFD I KHGR++E EARR FQQ+++AVDYCH   V HRDLKPEN+LLD++   KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WSCGVIL+ L+ G LPFD+ ++  L
Sbjct:   10 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 222          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.158e-58
Identity = 108/216 (50.00%), Postives = 155/216 (71.76%), Query Frame = 3
Query:  210 RTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R ++G Y LG TLG G+F KVK  ++  TG  VA+KI++R ++    +V +IKREI  +KL +HP++IK+ +V+++ T  ++V+E++ GGELFD I KHGR++E EARR FQQ+++AVDYCH   V HRDLKPEN+LLD+    KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WSCGVIL+ L+ G LPFD+ ++  L
Sbjct:   10 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 222          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.158e-58
Identity = 108/216 (50.00%), Postives = 155/216 (71.76%), Query Frame = 3
Query:  210 RTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R ++G Y LG TLG G+F KVK  ++  TG  VA+KI++R ++    +V +IKREI  +KL +HP++IK+ +V+++ T  ++V+E++ GGELFD I KHGR++E EARR FQQ+++AVDYCH   V HRDLKPEN+LLD+    KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WSCGVIL+ L+ G LPFD+ ++  L
Sbjct:   10 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 222          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.158e-58
Identity = 108/216 (50.00%), Postives = 155/216 (71.76%), Query Frame = 3
Query:  210 RTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R ++G Y LG TLG G+F KVK  ++  TG  VA+KI++R ++    +V +IKREI  +KL +HP++IK+ +V+++ T  ++V+E++ GGELFD I KHGR++E EARR FQQ+++AVDYCH   V HRDLKPEN+LLD+    KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WSCGVIL+ L+ G LPFD+ ++  L
Sbjct:   10 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 222          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: CIPKP_ORYSJ (CBL-interacting protein kinase 25 OS=Oryza sativa subsp. japonica GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.370e-58
Identity = 110/226 (48.67%), Postives = 160/226 (70.80%), Query Frame = 3
Query:  195 KVPASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKH-----GRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            K PA  T   +YE G  +GEG+FAKV   ++  TG+ VAIK++D+++++R    E IKREI+ M+ ++HPNV++I EVMA+K +I +V+E++ GG L+    +        L+E EARR+FQQL++AV YCHSRGVFHRD+K +NLL+D  G LK++DFGLSA++   R +  L T CGTP ++APEV   +GYDG  +DVW+CGV+L+VL+ G  PF + ++  L
Sbjct:   12 KPPAMTTE--RYEFGPLVGEGNFAKVYLGRHRATGEEVAIKVMDKEKLVRLGATELIKREIAVMQRLRHPNVVRIHEVMANKRRICVVMEYVRGGALYRYFRRGPSGGAAGLREHEARRFFQQLVSAVAYCHSRGVFHRDIKLDNLLVDEQGNLKVADFGLSALADMERREAHLQTVCGTPLFLAPEVFKRRGYDGAKADVWACGVVLYVLLTGRKPFPDEHVSRL 235          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.281e-57
Identity = 111/214 (51.87%), Postives = 158/214 (73.83%), Query Frame = 3
Query:  216 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R+G+Y++ +TLGEGSF KVK A++V TG  VA+KI++R  + +  M  +++REIS ++L++HP++IK+ +V+ SK +I +V+EF  G ELFD I + G++ EDEARR+FQQ+I AV+YCH   + HRDLKPENLLLD    +KI+DFGLS I   + +   L T+CG+PNY APEV++ K Y G   DVWS GVIL+V++ G LPFD+  + AL
Sbjct:   48 RIGRYQIIKTLGEGSFGKVKLAQHVGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFA-GKELFDYIVQRGKMPEDEARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSSGVILYVMLCGRLPFDDEFIPAL 257          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 6.356e-57
Identity = 109/218 (50.00%), Postives = 158/218 (72.48%), Query Frame = 3
Query:  204 ASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            A  +RVG Y++ +TLGEGSF KVK A +V TG  VA+KI+++  + +  M  +I+REIS ++L++HP++IK+ +V+ SK +I +V+E+  G ELFD I +  ++ E EARR+FQQ+I+AV+YCH   + HRDLKPENLLLD +  +KI+DFGLS I   + +   L T+CG+PNY APEV++ K Y G   DVWSCGVIL+V++   LPFD+ ++  L
Sbjct:   31 ADGSRVGNYQIVKTLGEGSFGKVKLAYHVTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRNKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL 244          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 6.356e-57
Identity = 110/230 (47.83%), Postives = 159/230 (69.13%), Query Frame = 3
Query:  168 TAEVEKMSVKVPASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            TAE +K        R R+G Y LG TLG G+F KVK  K+  TG  VA+KI++R ++    +V +I+REI  +KL +HP++IK+ +V+++ + I++V+E++ GGELFD I K+GRL E E+RR FQQ+++ VDYCH   V HRDLKPEN+LLD++   KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WS GVIL+ L+ G LPFD+ ++  L
Sbjct:    7 TAEKQKHD-----GRVRIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 228          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.416e-56
Identity = 109/230 (47.39%), Postives = 159/230 (69.13%), Query Frame = 3
Query:  168 TAEVEKMSVKVPASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            TAE +K        R ++G Y LG TLG G+F KVK  K+  TG  VA+KI++R ++    +V +I+REI  +KL +HP++IK+ +V+++ + I++V+E++ GGELFD I K+GRL E E+RR FQQ+++ VDYCH   V HRDLKPEN+LLD++   KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WS GVIL+ L+ G LPFD+ ++  L
Sbjct:   12 TAEKQKHD-----GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 233          
The following BLAST results are available for this feature:
BLAST of CK934275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AMPKA_DICDI5.200e-5952.805'-AMP-activated serine/threonine-protein kinase c... [more]
AAPK2_HUMAN5.200e-5950.005'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_RAT1.158e-5850.005'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG1.158e-5850.005'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_MOUSE1.158e-5850.005'-AMP-activated protein kinase catalytic subunit ... [more]
CIPKP_ORYSJ3.370e-5848.67CBL-interacting protein kinase 25 OS=Oryza sativa ... [more]
SNF1_CANTR1.281e-5751.87Carbon catabolite-derepressing protein kinase OS=C... [more]
SNF1_CANGA6.356e-5750.00Carbon catabolite-derepressing protein kinase OS=C... [more]
AAPK1_PONAB6.356e-5747.835'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_RAT1.416e-5647.395'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934275 ID=CK934275; Name=CK934275; organism=Citrus sinensis; type=EST; length=857bp
GGGATACAAGACGTGAGGAGCCAAGCAACTGGACCTCCTTCAAATCTTCG
TTCAAACCAACATTTTCAGGCAACGGAGGAATAAAGCCAATCTCCTTCGC
GTATCCATAACTATATATATACGCGCGCGCGCACAGCGGTGGTGTGGAAT
TGACCGCTATATATCGGACGGCGGAGGTTGAGAAAATGAGCGTGAAAGTA
CCGGCATCGAGGACACGTGTAGGGAAGTACGAGTTGGGAAGAACCCTTGG
TGAGGGTAGCTTTGCCAAGGTCAAGTTTGCAAAGAATGTTGAGACCGGAG
ATTTCGTGGCCATTAAAATTGTTGATCGTGATCAAGTCCTTCGTCACAAG
ATGGTCGAACAGATAAAACGTGAAATATCAACAATGAAGCTTATCAAACA
TCCGAATGTCATTAAAATTATTGAGGTCATGGCTAGCAAAACAAAGATAT
ACATTGTTCTCGAATTCATTGACGGCGGCGAGCTCTTCGATAAAATTGCG
AAGCATGGAAGATTGAAAGAGGATGAAGCCAGAAGATATTTCCAGCAGCT
CATTAATGCAGTGGACTATTGTCATAGCAGAGGGGTGTTCCATAGAGATT
TGAAGCCAGAGAATCTTCTCCTAGACTCGTATGGTGTTCTTAAAATTTCA
GATTTTGGTTTGAGTGCAATTTCTCAACAAGTACGGGAGGATGGGCTGCT
TCACACTGCTTGTGGTACACCAAATTATGTTGCTCCTGAGGTGCTCAATG
ACAAGGGATACGACGGTAGAGCATCTGATGTTTGGTCCTGCGGGGTTATT
CTCTTTGTACTTATGGCTGGGTTCTTGCCTTTTGATGAGTCGAATCTTAT
GGCTTTG
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