CK934275

Overview
NameCK934275
Unique NameCK934275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934275_ssr112 microsatellite CK934275_ssr112:112..121. BLAST: Citrus ESTs to Prunus persica proteins V1
CK934275_ssr122 microsatellite CK934275_ssr122:122..131. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1656 contig Csv1_Contig1656:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.416e-56
Identity = 109/230 (47.39%), Postives = 159/230 (69.13%), Query Frame = 3
Query:  168 TAEVEKMSVKVPASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            TAE +K        R ++G Y LG TLG G+F KVK  K+  TG  VA+KI++R ++    +V +I+REI  +KL +HP++IK+ +V+++ + I++V+E++ GGELFD I K+GRL E E+RR FQQ+++ VDYCH   V HRDLKPEN+LLD++   KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WS GVIL+ L+ G LPFD+ ++  L
Sbjct:   12 TAEKQKHD-----GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 233          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 219.935 bits (559), Expect = 1.416e-56
Identity = 109/230 (47.39%), Postives = 159/230 (69.13%), Query Frame = 3
Query:  168 TAEVEKMSVKVPASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            TAE +K        R ++G Y LG TLG G+F KVK  K+  TG  VA+KI++R ++    +V +I+REI  +KL +HP++IK+ +V+++ + I++V+E++ GGELFD I K+GRL E E+RR FQQ+++ VDYCH   V HRDLKPEN+LLD++   KI+DFGL   S  + +   L T+CG+PNY APEV++ + Y G   D+WS GVIL+ L+ G LPFD+ ++  L
Sbjct:   12 TAEKQKHD-----GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 233          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.155e-56
Identity = 105/219 (47.95%), Postives = 154/219 (70.32%), Query Frame = 3
Query:  201 PASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            P     VG Y L +TLG+G    VK   +  TG  VA+KIV+R++ L   ++ +++REI+ +KLI+HP+V+K+ +V  +K  +Y+VLE + GGELFD + K GRL   EAR++F+Q+++A+D+CHS  + HRDLKPENLLLD    ++I+DFG++++      D LL T+CG+P+Y  PEV+  + YDGR +D+WSCGVILF L+ G LPFD+ NL  L
Sbjct:   25 PQHAQYVGPYRLEKTLGKGQTGLVKLGVHCITGQKVAVKIVNREK-LSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQV---GDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQL 239          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.155e-56
Identity = 105/213 (49.30%), Postives = 153/213 (71.83%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            VG Y L +TLG+G    VK   +  TG  VAIKIV+R++ L   ++ +++REI+ +KLI+HP+V+K+ +V  +K  +Y+VLE + GGELFD + K GRL   EAR++F+Q+++A+D+CHS  + HRDLKPENLLLD    ++I+DFG++++      D LL T+CG+P+Y  PEV+  + YDGR +D+WSCGVILF L+ G LPFD+ NL  L
Sbjct:   47 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREK-LSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQV---GDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQL 255          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: AAPK2_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Caenorhabditis elegans GN=aak-2 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 3.155e-56
Identity = 106/217 (48.85%), Postives = 153/217 (70.51%), Query Frame = 3
Query:  207 SRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            ++ ++G Y L  TLG G+F KVK   +  T   VA+KI++R ++    +V +I+REI  + L +HP++I++ +V+++ + I++++E + GGELFD I KHGRLK  EARR+FQQ+I+ VDYCH   V HRDLKPENLLLD    +KI+DFGLS I   + +   L T+CG+PNY APEV++ K Y G   DVWSCGVIL+ L+ G LPFD+ ++ +L
Sbjct:   80 AQIKIGHYILKETLGVGTFGKVKVGIHETTQYKVAVKILNRQKIKSLDVVGKIRREIQNLSLFRHPHIIRLYQVISTPSDIFMIMEHVSGGELFDYIVKHGRLKTAEARRFFQQIISGVDYCHRHMVVHRDLKPENLLLDEQNNVKIADFGLSNI---MTDGDFLRTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDEHVPSL 293          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.120e-56
Identity = 110/215 (51.16%), Postives = 159/215 (73.95%), Query Frame = 3
Query:  216 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYV-APEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R+G+Y++ +TLGEGSF KVK A+++ TG  VA+KI++R  + +  M  +++REIS ++L++HP++IK+ +V+ SK +I +V+EF  G ELFD I + G++ EDEARR+FQQ+I AV+YCH   + HRDLKPENLLLD    +KI+DFGLS I   + +   L T+CG+PNY+ APEV++ K Y G   DVWS GVIL+V++ G LPFD+  + AL
Sbjct:   49 RIGRYQILKTLGEGSFGKVKLAQHLGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFA-GKELFDYIVQRGKMPEDEARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGLSNI---MTDGNFLKTSCGSPNYMPAPEVISGKLYAGPEVDVWSAGVILYVMLCGRLPFDDEFIPAL 259          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 218.009 bits (554), Expect = 5.381e-56
Identity = 106/213 (49.77%), Postives = 152/213 (71.36%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            VG Y L +TLG+G    VK   +  T   VAIKIV+R++ L   ++ +++REI+ +KLI+HP+V+K+ +V  +K  +Y+VLE + GGELFD + K GRL   EAR++F+Q+I+A+D+CHS  + HRDLKPENLLLD    ++I+DFG++++      D LL T+CG+P+Y  PEV+  + YDGR +DVWSCGVILF L+ G LPFD+ NL  L
Sbjct:   16 VGPYRLEKTLGKGQTGLVKLGVHCVTCQKVAIKIVNREK-LSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNNIRIADFGMASLQV---GDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNLRQL 224          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.028e-56
Identity = 106/213 (49.77%), Postives = 152/213 (71.36%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            VG Y L +TLG+G    VK   +  T   VAIKIV+R++ L   ++ +++REI+ +KLI+HP+V+K+ +V  +K  +Y+VLE + GGELFD + K GRL   EAR++F+Q+I+A+D+CHS  + HRDLKPENLLLD    ++I+DFG++++      D LL T+CG+P+Y  PEV+  + YDGR +DVWSCGVILF L+ G LPFD+ NL  L
Sbjct:   17 VGPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREK-LSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDERNNIRIADFGMASLQV---GDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNLRQL 225          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SNF1_YEAST (Carbon catabolite-derepressing protein kinase OS=Saccharomyces cerevisiae GN=SNF1 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.566e-55
Identity = 106/218 (48.62%), Postives = 155/218 (71.10%), Query Frame = 3
Query:  204 ASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            A    +G Y++ +TLGEGSF KVK A +  TG  VA+KI+++  + +  M  +I+REIS ++L++HP++IK+ +V+ SK +I +V+E+  G ELFD I +  ++ E EARR+FQQ+I+AV+YCH   + HRDLKPENLLLD +  +KI+DFGLS I   + +   L T+CG+PNY APEV++ K Y G   DVWSCGVIL+V++   LPFD+ ++  L
Sbjct:   47 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL 260          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.015e-54
Identity = 103/214 (48.13%), Postives = 154/214 (71.96%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVL-RHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            VG + +G+TLG+G+  KVK   + +TG  V IKI++++ ++ +  M  +I+REI  MKLI HPN +K+ EV  +   ++++LE+++GGELFD + + G L+  EA  +FQQ+I  ++YCHSR + HRDLKPENLLL     +KI+DFG+ +I   VR+D LLHT+CG+P+Y +PEV++   YDG+ +DVWSCGVIL+ L+ G LPFD+ N+  L
Sbjct:    6 VGPFIIGKTLGQGTTGKVKLGFHKDTGFKVGIKIINKELLINKPSMRRKIEREIVLMKLIDHPNAMKMYEVYETSKYLFLILEYVEGGELFDYLVEKGGLESGEALFFFQQIIIGLEYCHSRNICHRDLKPENLLLSGDKRIKIADFGMGSI---VRKDMLLHTSCGSPHYASPEVVSGIDYDGQKADVWSCGVILYALLTGKLPFDDENIRRL 216          
The following BLAST results are available for this feature:
BLAST of CK934275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK1_MOUSE1.416e-5647.395'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN1.416e-5647.395'-AMP-activated protein kinase catalytic subunit ... [more]
BRSK1_MOUSE3.155e-5647.95BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN3.155e-5649.30BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
AAPK2_CAEEL3.155e-5648.855'-AMP-activated protein kinase catalytic subunit ... [more]
SNF1_CANAL4.120e-5651.16Carbon catabolite-derepressing protein kinase OS=C... [more]
BRSK2_HUMAN5.381e-5649.77BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]
BRSK2_MOUSE7.028e-5649.77BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
SNF1_YEAST1.566e-5548.62Carbon catabolite-derepressing protein kinase OS=S... [more]
Y7165_DICDI1.015e-5448.13Probable serine/threonine-protein kinase DDB_G0277... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934275 ID=CK934275; Name=CK934275; organism=Citrus sinensis; type=EST; length=857bp
GGGATACAAGACGTGAGGAGCCAAGCAACTGGACCTCCTTCAAATCTTCG
TTCAAACCAACATTTTCAGGCAACGGAGGAATAAAGCCAATCTCCTTCGC
GTATCCATAACTATATATATACGCGCGCGCGCACAGCGGTGGTGTGGAAT
TGACCGCTATATATCGGACGGCGGAGGTTGAGAAAATGAGCGTGAAAGTA
CCGGCATCGAGGACACGTGTAGGGAAGTACGAGTTGGGAAGAACCCTTGG
TGAGGGTAGCTTTGCCAAGGTCAAGTTTGCAAAGAATGTTGAGACCGGAG
ATTTCGTGGCCATTAAAATTGTTGATCGTGATCAAGTCCTTCGTCACAAG
ATGGTCGAACAGATAAAACGTGAAATATCAACAATGAAGCTTATCAAACA
TCCGAATGTCATTAAAATTATTGAGGTCATGGCTAGCAAAACAAAGATAT
ACATTGTTCTCGAATTCATTGACGGCGGCGAGCTCTTCGATAAAATTGCG
AAGCATGGAAGATTGAAAGAGGATGAAGCCAGAAGATATTTCCAGCAGCT
CATTAATGCAGTGGACTATTGTCATAGCAGAGGGGTGTTCCATAGAGATT
TGAAGCCAGAGAATCTTCTCCTAGACTCGTATGGTGTTCTTAAAATTTCA
GATTTTGGTTTGAGTGCAATTTCTCAACAAGTACGGGAGGATGGGCTGCT
TCACACTGCTTGTGGTACACCAAATTATGTTGCTCCTGAGGTGCTCAATG
ACAAGGGATACGACGGTAGAGCATCTGATGTTTGGTCCTGCGGGGTTATT
CTCTTTGTACTTATGGCTGGGTTCTTGCCTTTTGATGAGTCGAATCTTAT
GGCTTTG
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