CK934275

Overview
NameCK934275
Unique NameCK934275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934275_ssr112 microsatellite CK934275_ssr112:112..121. BLAST: Citrus ESTs to Prunus persica proteins V1
CK934275_ssr122 microsatellite CK934275_ssr122:122..131. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1656 contig Csv1_Contig1656:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SNF1_SCHPO (SNF1-like protein kinase ssp2 OS=Schizosaccharomyces pombe GN=ssp2 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.261e-54
Identity = 104/211 (49.29%), Postives = 148/211 (70.14%), Query Frame = 3
Query:  207 SRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDE 839
            S+  +G Y +  TLGEGSF KVK A + +T   VA+K + R  + +  M  +++REIS +KL++HP++IK+ +V+ + T I +V+E+  GGELFD I +  R+ EDE RR+FQQ+I A++YCH   + HRDLKPENLLLD    +KI+DFGLS I   + +   L T+CG+PNY APEV+N K Y G   DVWSCG++L+V++ G LPFD+
Sbjct:   27 SKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 233          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.036e-54
Identity = 103/219 (47.03%), Postives = 147/219 (67.12%), Query Frame = 3
Query:  201 PASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            P  +  VG Y L RT+G+G+FAKVK A+++ TG  VAIKI+D+ Q L    ++++ RE+  MK + HPN++K+ EV+ ++  +Y+V+E+   GE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   D+WS GVIL+ L++G LPFD  NL  L
Sbjct:   50 PEEQPHVGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFG---FSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKEL 264          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.036e-54
Identity = 103/219 (47.03%), Postives = 147/219 (67.12%), Query Frame = 3
Query:  201 PASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            P  +  VG Y L RT+G+G+FAKVK A+++ TG  VAIKI+D+ Q L    ++++ RE+  MK + HPN++K+ EV+ ++  +Y+V+E+   GE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   D+WS GVIL+ L++G LPFD  NL  L
Sbjct:   50 PEEQPHVGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFG---FSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKEL 264          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: CIPKT_ORYSJ (CBL-interacting protein kinase 29 OS=Oryza sativa subsp. japonica GN=CIPK29 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.036e-54
Identity = 109/228 (47.81%), Postives = 155/228 (67.98%), Query Frame = 3
Query:  204 ASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIV------------DRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLM 851
            A R  +G+YELG  LG G+ AKV  A+++ TG  VAIK              + D +LR   +E   RE + +  ++H +V+++ E++A++ K++ VL+   GGELF  +   GR+ ED AR YF+QLI+AV YCHSRGV+HRD+KPENLLLD  G LK++DFGL A++    +  L HT CGTP YVAPE+L+ KGY+    D+WSCGV+LFVL AG+LPF++++L+
Sbjct:   24 AGRVLLGRYELGGLLGRGASAKVYLARDLLTGRDVAIKSFPNPRHGGGLRGGEEDVLLRPAPIE---REAAILPRLRHRHVMRLREILATRKKVHFVLDLAAGGELFSLLDASGRMTEDLARHYFRQLISAVRYCHSRGVYHRDIKPENLLLDDAGDLKVADFGLGAVA----DGALHHTLCGTPAYVAPEILSRKGYNPAKVDIWSCGVVLFVLAAGYLPFNDASLV 244          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.578e-54
Identity = 113/248 (45.56%), Postives = 158/248 (63.71%), Query Frame = 3
Query:  126 RAHSGGVELTAIYRTAEVEKMSVKVPASRT----RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R+H      ++  R+     MS +  A R      VGKY+L +T+G+G+FAKVK AK+V TG  VAIKI+D+   L    ++++ RE+  MK + HPN++K+ +VM ++  +Y+VLE+  GGE+FD +  HGR+KE EAR  F+Q+++AV Y HS+ + HRDLK ENLLLD    +KI+DFG    S        L T CG+P Y APE+ + K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:  132 RSHPTSGSSSSHARSTGQSGMSSRSAARRNDQDVHVGKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKT-ALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFG---FSNTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 375          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.578e-54
Identity = 102/213 (47.89%), Postives = 147/213 (69.01%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A++V TG  VA+KI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+V+E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   57 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFG---FSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 265          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK1_MOUSE (Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.578e-54
Identity = 102/213 (47.89%), Postives = 147/213 (69.01%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A++V TG  VA+KI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+V+E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   57 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFG---FSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 265          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK1_HUMAN (Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 8.591e-54
Identity = 102/213 (47.89%), Postives = 146/213 (68.54%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A++V TG  VA+KI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+V+E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD    +KI+DFG    S +      L T CG+P Y APE+   K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   57 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFG---FSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 265          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: PAR1_CAEBR (Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.122e-53
Identity = 106/213 (49.77%), Postives = 146/213 (68.54%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            VGKY+L +T+G+G+FAKVK AK+V TG  VAIKI+D+   L    ++++ RE+  MK + HPN++K+ +VM ++  +Y+VLE+  GGE+FD +  HGR+KE EAR  F+Q+++AV Y HS+ + HRDLK ENLLLD    +KI+DFG    S        L T CG+P Y APE+ + K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:  125 VGKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKT-ALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFG---FSNTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 333          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.122e-53
Identity = 101/213 (47.42%), Postives = 147/213 (69.01%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A+++ TG  VAIKI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+++E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   53 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKITDFG---FSNEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 261          
The following BLAST results are available for this feature:
BLAST of CK934275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SNF1_SCHPO2.261e-5449.29SNF1-like protein kinase ssp2 OS=Schizosaccharomyc... [more]
MARK4_MOUSE5.036e-5447.03MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN5.036e-5447.03MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
CIPKT_ORYSJ5.036e-5447.81CBL-interacting protein kinase 29 OS=Oryza sativa ... [more]
PAR1_CAEEL6.578e-5445.56Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
MARK1_RAT6.578e-5447.89Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]
MARK1_MOUSE6.578e-5447.89Serine/threonine-protein kinase MARK1 OS=Mus muscu... [more]
MARK1_HUMAN8.591e-5447.89Serine/threonine-protein kinase MARK1 OS=Homo sapi... [more]
PAR1_CAEBR1.122e-5349.77Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
MARK3_RAT1.122e-5347.42MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934275 ID=CK934275; Name=CK934275; organism=Citrus sinensis; type=EST; length=857bp
GGGATACAAGACGTGAGGAGCCAAGCAACTGGACCTCCTTCAAATCTTCG
TTCAAACCAACATTTTCAGGCAACGGAGGAATAAAGCCAATCTCCTTCGC
GTATCCATAACTATATATATACGCGCGCGCGCACAGCGGTGGTGTGGAAT
TGACCGCTATATATCGGACGGCGGAGGTTGAGAAAATGAGCGTGAAAGTA
CCGGCATCGAGGACACGTGTAGGGAAGTACGAGTTGGGAAGAACCCTTGG
TGAGGGTAGCTTTGCCAAGGTCAAGTTTGCAAAGAATGTTGAGACCGGAG
ATTTCGTGGCCATTAAAATTGTTGATCGTGATCAAGTCCTTCGTCACAAG
ATGGTCGAACAGATAAAACGTGAAATATCAACAATGAAGCTTATCAAACA
TCCGAATGTCATTAAAATTATTGAGGTCATGGCTAGCAAAACAAAGATAT
ACATTGTTCTCGAATTCATTGACGGCGGCGAGCTCTTCGATAAAATTGCG
AAGCATGGAAGATTGAAAGAGGATGAAGCCAGAAGATATTTCCAGCAGCT
CATTAATGCAGTGGACTATTGTCATAGCAGAGGGGTGTTCCATAGAGATT
TGAAGCCAGAGAATCTTCTCCTAGACTCGTATGGTGTTCTTAAAATTTCA
GATTTTGGTTTGAGTGCAATTTCTCAACAAGTACGGGAGGATGGGCTGCT
TCACACTGCTTGTGGTACACCAAATTATGTTGCTCCTGAGGTGCTCAATG
ACAAGGGATACGACGGTAGAGCATCTGATGTTTGGTCCTGCGGGGTTATT
CTCTTTGTACTTATGGCTGGGTTCTTGCCTTTTGATGAGTCGAATCTTAT
GGCTTTG
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