CK934275

Overview
NameCK934275
Unique NameCK934275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934275_ssr112 microsatellite CK934275_ssr112:112..121. BLAST: Citrus ESTs to Prunus persica proteins V1
CK934275_ssr122 microsatellite CK934275_ssr122:122..131. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1656 contig Csv1_Contig1656:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.122e-53
Identity = 101/213 (47.42%), Postives = 147/213 (69.01%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A+++ TG  VAIKI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+++E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   53 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG---FSNEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 261          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.122e-53
Identity = 101/213 (47.42%), Postives = 147/213 (69.01%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A+++ TG  VA+KI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+V+E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   50 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG---FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 258          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.122e-53
Identity = 101/213 (47.42%), Postives = 147/213 (69.01%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A+++ TG  VA+KI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+V+E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K YDG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   50 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG---FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 258          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 9.498e-53
Identity = 100/213 (46.95%), Postives = 146/213 (68.54%), Query Frame = 3
Query:  219 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            +G Y L +T+G+G+FAKVK A+++ TG  VA+KI+D+ Q L    ++++ RE+  MK++ HPN++K+ EV+ ++  +Y+V+E+  GGE+FD +  HGR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLD+   +KI+DFG    S +      L T CG+P Y APE+   K  DG   DVWS GVIL+ L++G LPFD  NL  L
Sbjct:   50 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG---FSNEFTFGNKLDTFCGSPPYAAPELFQGKKIDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 258          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SIK3_DANRE (Serine/threonine-protein kinase SIK3 homolog OS=Danio rerio GN=zgc:66101 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 104/214 (48.60%), Postives = 148/214 (69.16%), Query Frame = 3
Query:  216 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            RVG YE+ RT+G+G+FA VK A ++ T   VAIKIVD+ Q L  + +++I RE+  MK+++HP++I++ +VM ++  IY+V E+  GGE+FD +  HGR+ E +ARR F+Q++ AV +CH R + HRDLK ENLLLD    +KI+DFG S +  + +   LL T CG+P Y APE+   K YDG   D+WS GV+L+VL+ G LPFD S L  L
Sbjct:   55 RVGYYEMERTIGKGNFAVVKLATHMITKAKVAIKIVDKTQ-LDDENLKKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVYFCHCRSIVHRDLKAENLLLDHNLNIKIADFGFSNLFSRGQ---LLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNL 264          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: HSL1_YEAST (Probable serine/threonine-protein kinase HSL1 OS=Saccharomyces cerevisiae GN=HSL1 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 109/253 (43.08%), Postives = 153/253 (60.47%), Query Frame = 3
Query:  207 SRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRH-------------KMVEQ----------------------IKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYG-VLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            SR  VG ++LG+TLG+GS  +V+ AKN+ETG   AIKIV + +   H              MV                        I+REI  MKLI H NV+ + EV  +K+++Y+VLE++DGGELFD +   G+L E EA  YF+Q++  V YCHS  + HRDLKPENLLLD     +KI+DFG++A+      + LL T+CG+P+Y +PE++  + Y G  SDVWSCG++LF L+ G LPF++ N+  L
Sbjct:   74 SRDTVGPWKLGKTLGKGSSGRVRLAKNMETGQLAAIKIVPKKKAFVHCSNNGTVPNSYSSSMVTSNVSSPSIASREHSNHSQTNPYGIEREIVIMKLISHTNVMALFEVWENKSELYLVLEYVDGGELFDYLVSKGKLPEREAIHYFKQIVEGVSYCHSFNICHRDLKPENLLLDKKNRRIKIADFGMAALE---LPNKLLKTSCGSPHYASPEIVMGRPYHGGPSDVWSCGIVLFALLTGHLPFNDDNIKKL 323          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 203.756 bits (517), Expect = 1.050e-51
Identity = 103/214 (48.13%), Postives = 146/214 (68.22%), Query Frame = 3
Query:  216 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R+G YE+ RT+G+G+FA VK A ++ T   VAIKI+D+ Q L  + +++I RE+  MK++ HP++I++ +VM ++  IY+V E+  GGE+FD +  HGR+ E EARR F+Q++ AV +CH R + HRDLK ENLLLD+   +KI+DFG S +        LL T CG+P Y APE+   K YDG   D+WS GV+L+VL+ G LPFD S L  L
Sbjct:    4 RIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKSQ-LDEENLKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNL---FTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNL 213          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SIK3_HUMAN (Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.372e-51
Identity = 103/214 (48.13%), Postives = 146/214 (68.22%), Query Frame = 3
Query:  216 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            R+G YE+ RT+G+G+FA VK A ++ T   VAIKI+D+ Q L  + +++I RE+  MK++ HP++I++ +VM ++  IY+V E+  GGE+FD +  HGR+ E EARR F+Q++ AV +CH R + HRDLK ENLLLD+   +KI+DFG S +        LL T CG+P Y APE+   K YDG   D+WS GV+L+VL+ G LPFD S L  L
Sbjct:    4 RIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQ-LDEENLKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNL---FTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNL 213          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: KCC4_YEAST (Probable serine/threonine-protein kinase KCC4 OS=Saccharomyces cerevisiae GN=KCC4 PE=1 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 1.791e-51
Identity = 106/237 (44.73%), Postives = 151/237 (63.71%), Query Frame = 3
Query:  171 AEVEKMSVKVPASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDR------------DQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESN 845
            A  E  S   P+S   +G ++LG TLG GS  KV+ A++  TG   A+K++ +            D VL +     I+REI  MKL+ HPNV+ + +V  +   +Y++LE+ + GELF+ +  HG L E EA   F+Q+I  + YCH+ G+ HRDLKPENLLLDS+  +KI+DFG++A+     +  LL T+CG+P+Y APE+++   Y+G ASDVWSCGVILF L+ G LPFDE N
Sbjct:    4 ANTETHSAAKPSST--IGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYN----IEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQ---TDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEEN 231          
BLAST of CK934275 vs. ExPASy Swiss-Prot
Match: SIK2_MOUSE (Serine/threonine-protein kinase SIK2 OS=Mus musculus GN=Sik2 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.339e-51
Identity = 105/214 (49.07%), Postives = 143/214 (66.82%), Query Frame = 3
Query:  216 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHTACGTPNYVAPEVLNDKGYDGRASDVWSCGVILFVLMAGFLPFDESNLMAL 857
            RVG Y++  TLG+G+FA VK  ++  T   VAIKI+D+ Q L    +E+I RE+  MK++ HP++IK+ +VM +K+ +Y+V E+   GE+FD +A HGRL E EARR F Q+++AVDYCH R V HRDLK ENLLLD+   +KI+DFG        +   LL T CG+P Y APEV   + Y+G   D+WS GV+L+VL+ G LPFD   L  L
Sbjct:   16 RVGFYDIEGTLGKGNFAVVKLGRHRTTKTEVAIKIIDKSQ-LDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKVVHRDLKAENLLLDNNMNIKIADFGFGNF---FKTGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPIL 225          
The following BLAST results are available for this feature:
BLAST of CK934275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MARK3_MOUSE1.122e-5347.42MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK2_RAT1.122e-5347.42Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_HUMAN1.122e-5347.42Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
MARK2_MOUSE9.498e-5346.95Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
SIK3_DANRE6.156e-5248.60Serine/threonine-protein kinase SIK3 homolog OS=Da... [more]
HSL1_YEAST6.156e-5243.08Probable serine/threonine-protein kinase HSL1 OS=S... [more]
SIK3_MOUSE1.050e-5148.13Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]
SIK3_HUMAN1.372e-5148.13Serine/threonine-protein kinase SIK3 OS=Homo sapie... [more]
KCC4_YEAST1.791e-5144.73Probable serine/threonine-protein kinase KCC4 OS=S... [more]
SIK2_MOUSE2.339e-5149.07Serine/threonine-protein kinase SIK2 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934275 ID=CK934275; Name=CK934275; organism=Citrus sinensis; type=EST; length=857bp
GGGATACAAGACGTGAGGAGCCAAGCAACTGGACCTCCTTCAAATCTTCG
TTCAAACCAACATTTTCAGGCAACGGAGGAATAAAGCCAATCTCCTTCGC
GTATCCATAACTATATATATACGCGCGCGCGCACAGCGGTGGTGTGGAAT
TGACCGCTATATATCGGACGGCGGAGGTTGAGAAAATGAGCGTGAAAGTA
CCGGCATCGAGGACACGTGTAGGGAAGTACGAGTTGGGAAGAACCCTTGG
TGAGGGTAGCTTTGCCAAGGTCAAGTTTGCAAAGAATGTTGAGACCGGAG
ATTTCGTGGCCATTAAAATTGTTGATCGTGATCAAGTCCTTCGTCACAAG
ATGGTCGAACAGATAAAACGTGAAATATCAACAATGAAGCTTATCAAACA
TCCGAATGTCATTAAAATTATTGAGGTCATGGCTAGCAAAACAAAGATAT
ACATTGTTCTCGAATTCATTGACGGCGGCGAGCTCTTCGATAAAATTGCG
AAGCATGGAAGATTGAAAGAGGATGAAGCCAGAAGATATTTCCAGCAGCT
CATTAATGCAGTGGACTATTGTCATAGCAGAGGGGTGTTCCATAGAGATT
TGAAGCCAGAGAATCTTCTCCTAGACTCGTATGGTGTTCTTAAAATTTCA
GATTTTGGTTTGAGTGCAATTTCTCAACAAGTACGGGAGGATGGGCTGCT
TCACACTGCTTGTGGTACACCAAATTATGTTGCTCCTGAGGTGCTCAATG
ACAAGGGATACGACGGTAGAGCATCTGATGTTTGGTCCTGCGGGGTTATT
CTCTTTGTACTTATGGCTGGGTTCTTGCCTTTTGATGAGTCGAATCTTAT
GGCTTTG
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