CK934281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2B_PONAB (Charged multivesicular body protein 2b OS=Pongo abelii GN=CHMP2B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.881e-15 Identity = 53/189 (28.04%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 K ++++ R+LR R I R ++++EK ++ IK AK + + K LA++LV RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D V++VL I E + ++ +A R SA TS+ Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSK 195
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2B_HUMAN (Charged multivesicular body protein 2b OS=Homo sapiens GN=CHMP2B PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.881e-15 Identity = 53/189 (28.04%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 K ++++ R+LR R I R ++++EK ++ IK AK + + K LA++LV RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D V++VL I E + ++ +A R SA TS+ Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSK 195
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2B_XENTR (Charged multivesicular body protein 2b OS=Xenopus tropicalis GN=chmp2b PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14 Identity = 50/189 (26.46%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 K ++R+ ++LR R I R ++++EK ++ IK AK + + + LA++LV+ RK R Y +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D+ V++VL I E + ++ +A + S S+ Sbjct: 7 KKTVDDIIREQNKELRGTQRAITRDRAALEKQEKQLEMEIKKMAKAGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKGLPSTSASK 195
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2B_MOUSE (Charged multivesicular body protein 2b OS=Mus musculus GN=Chmp2b PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14 Identity = 52/189 (27.51%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D V++VL I E + ++ +A R SA TS+ Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSK 195
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2B_BOVIN (Charged multivesicular body protein 2b OS=Bos taurus GN=CHMP2B PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14 Identity = 52/189 (27.51%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D V++VL I E + ++ +A R SA TS+ Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSK 195
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2A_XENLA (Charged multivesicular body protein 2a OS=Xenopus laevis GN=chmp2a PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.422e-14 Identity = 43/161 (26.71%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVL 693 + P++LLR QR L + R ++R+ + ++++EK + IK AK+ M + K +A++LVR+R+ V + +A + ++S+ + + + + M +N +K P++ M EF K+ + EE +NDA+D A+ V +VL Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVL 168
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2B_DANRE (Charged multivesicular body protein 2b OS=Danio rerio GN=chmp2b PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.164e-14 Identity = 50/195 (25.64%), Postives = 91/195 (46.67%), Query Frame = 1 Query: 193 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 M + K ++++ ++LR R I R ++++EK ++ IK AK + + K LA++LV+ RK R Y +++ S+S + + G + + + M+ VN M + T+Q F KE K + EE +ND +D + V++VL I E + ++ A R SA T++ Sbjct: 1 MTSLFKKKTVDDVIKEQNKELRGTQRQIARDRTALEKQEKQLEMEIKKMAKTGNRDACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKMAHAPSAARKTPSAATAK 195
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CH2BB_XENLA (Charged multivesicular body protein 2b-B OS=Xenopus laevis GN=chmp2b-B PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.164e-14 Identity = 47/175 (26.86%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEA 735 K ++R+ ++LR R I R ++++EK ++ IK AK + + + LA++LV+ RK R Y +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + +E +ND +D D+ V++VL I E + ++ +A Sbjct: 7 KKTVDDIIREQNKELRGTQRAITRDRAALEKQEKQLEMEIKKMAKTGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTDEMINDTLDDIFDASEDEEESQDIVNQVLDEIGIEISGKMAKA 181
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2A_XENTR (Charged multivesicular body protein 2a OS=Xenopus tropicalis GN=chmp2a PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14 Identity = 42/161 (26.09%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVL 693 + P+++LR QR L + R ++R+ + ++++EK + IK AK+ M + K +A++LVR+R+ V + +A + ++S+ + + + + M +N +K P++ M EF K+ + EE +NDA+D A+ V +VL Sbjct: 8 RKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVL 168
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: DID4_YEAST (DOA4-independent degradation protein 4 OS=Saccharomyces cerevisiae GN=DID4 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14 Identity = 46/170 (27.06%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTAL-DSXXXXXXXXXXVDKVLTAIAGETAAQL 726 PQ+ L+ QR L + R +ER+ R ++ ++K + IK +AK +++AK A++LVR+R + + KAQ+ +IS+ + + + ++++ ++ +N M P++ EF K+ G +EF+++A+D + D V+KVL I + +QL Sbjct: 14 PQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQL 183 The following BLAST results are available for this feature:
BLAST of CK934281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934281 ID=CK934281; Name=CK934281; organism=Citrus sinensis; type=EST; length=886bpback to top |