CK934282

Overview
NameCK934282
Unique NameCK934282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRXS8_ORYSJ (Monothiol glutaredoxin-S8 OS=Oryza sativa subsp. japonica GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  157 VTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQL------------GCQPIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            VTR+ +++ VV+FS+SSC MSHA+  L+   G +  V ELDE P G  +E  L  +            G   +VP VFIG +LVG   +VMSL V   L  LL  AGA+W+
Sbjct:    4 VTRLASQKAVVVFSKSSCGMSHAVTRLLRELGVDARVVELDEEPAGADMENALAGMLLAGTAANGGGRGRGVVVPTVFIGGRLVGSTDRVMSLHVAGGLVPLLRDAGALWV 114          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRC14_ARATH (Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  157 VTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQLGCQPIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLL 429
            V RM +E+ VVIF++SSC + +A++ L       PT++E+D  P+ R+IE+ LV+LGC   VPAVF+  +LVG    VMSL ++  L  L+
Sbjct:    4 VMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRLGCANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLI 94          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRC15_ORYSJ (Glutaredoxin-C15 OS=Oryza sativa subsp. japonica GN=GRXC15 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1
Query:  157 VTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIP-NGRQIERELVQ-LGCQPIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            V ++  E+ VVIF+ S+C M H + +L    G    V+ELD  P +GR +ER+L + LG  P VPAVFI  +LVG   +VMSL +  +L  +L  AGAIW+
Sbjct:    4 VAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARRLGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRC11_ORYSJ (Putative glutaredoxin-C11 OS=Oryza sativa subsp. japonica GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  145 METVVTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQ--LGCQ----PIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            M  +V R+ +ER VV+F++S C M  A+  L+     +  V+ELD  P G+++E+EL +   G      P VPAVFIG  LVGG  +VM++ +  +L  LL  AGA+W+
Sbjct:    1 MAEMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDRDPLGKEMEKELARRLYGSSGRGGPAVPAVFIGGSLVGGTSKVMAMHLKGELVPLLKSAGALWL 109          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRXC8_ARATH (Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 46/107 (42.99%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  157 VTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQ-LGCQP-------IVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            +  M AE  VVIFS S+C M HAIK L    G +P V+ELD +P G +I R L++ LGC          +P VFIG ++VG  ++VM+  +   L  LL  AGA+W+
Sbjct:   34 IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRC12_ORYSJ (Putative glutaredoxin-C12 OS=Oryza sativa subsp. japonica GN=GRXC12 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  145 METVVTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQL------GCQPIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            M  +V R+ +ER VV+F++S C M  A+  L+     +  V+ELD  P G+++EREL +          P VPAVFIG  LVGG  +VM++ +  +L  +L  AGA+W+
Sbjct:    1 MAEMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDREPLGKEMERELARRLYGSGGRGGPAVPAVFIGGSLVGGTSKVMTVHLKGELVPMLKSAGALWL 109          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1
Query:  148 ETVVTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDE-----IPNGRQIERELVQLGCQPIV---PAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            E  + R+++E PV+IFSRSSC M H +K L+ + G  PTV ELD+     +P   Q E      G   +V   PAVFIG++ VGG + +++L ++ QL   L++ GA+W+
Sbjct:   39 EAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYS----GGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGALWV 144          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRC13_ORYSJ (Glutaredoxin-C13 OS=Oryza sativa subsp. japonica GN=GRXC13 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 1
Query:  145 METVVTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQL------GCQPIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            M  +V R+ +ER VV+F++S C M  A+  L+     +  V+ELD  P G+++EREL +          P VPAVFIG  LVG   +VM++ +  +L  +L  AGA+W+
Sbjct:    1 MAEMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDREPLGKEMERELARRLYGSGGRGGPAVPAVFIGGSLVGSTSKVMAMHLKGELVPMLKNAGALWL 109          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  157 VTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQ-LGCQ-----PIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            +  + +E  VVIFS S+C M HA+K L    G +P V+ELD  P G  I+R L++ LGC        +P VFIG +LVG   +VM+  +   L  LL  AGA+W+
Sbjct:   32 IESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136          
BLAST of CK934282 vs. ExPASy Swiss-Prot
Match: GRXS9_ORYSJ (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 1
Query:  148 ETVVTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQLGCQPIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 453
            E  V R VAE PVV+  RS C +SH +K L+   G NP V+E+     G      +V  G    +PAVF+G +L+GG  ++M++ ++ +L  +L  AGA+W+
Sbjct:   35 EEEVRRAVAECPVVVVGRSGCCLSHVVKRLLQGLGVNPAVHEV----AGEAELAGVVAGGGGVALPAVFVGGRLLGGLDRLMAVHISGELVPILKEAGALWL 132          
The following BLAST results are available for this feature:
BLAST of CK934282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
GRXS8_ORYSJ1.500e-1542.34Monothiol glutaredoxin-S8 OS=Oryza sativa subsp. j... [more]
GRC14_ARATH2.558e-1543.96Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14... [more]
GRC15_ORYSJ3.341e-1544.55Glutaredoxin-C15 OS=Oryza sativa subsp. japonica G... [more]
GRC11_ORYSJ3.341e-1540.37Putative glutaredoxin-C11 OS=Oryza sativa subsp. j... [more]
GRXC8_ARATH5.699e-1542.99Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 P... [more]
GRC12_ORYSJ5.699e-1539.45Putative glutaredoxin-C12 OS=Oryza sativa subsp. j... [more]
GRXC6_ARATH7.444e-1540.00Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 P... [more]
GRC13_ORYSJ1.658e-1438.53Glutaredoxin-C13 OS=Oryza sativa subsp. japonica G... [more]
GRXC7_ARATH6.302e-1441.90Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 P... [more]
GRXS9_ORYSJ2.027e-1238.24Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934282 ID=CK934282; Name=CK934282; organism=Citrus sinensis; type=EST; length=703bp
GGGGACAGCNNNCAAAGCCTAATCCTCAACACACACTACCTAGTAGTCCG
ATCTCATATGTAGAAAACTTGAATTAATTTGCGTTAATTTTCTCACAATA
TACTTGTTTTGTTTTAGTTAGTGGTAAATAAACATCAATAAAGAATGGAG
ACGGTGGTGACAAGGATGGTAGCAGAAAGGCCAGTGGTGATATTCAGCAG
GAGCTCATGCTCGATGAGCCATGCCATAAAGGCACTGATCTGCAGCTTCG
GGGCGAATCCAACGGTATACGAGCTAGATGAAATTCCAAATGGACGGCAG
ATAGAGAGGGAGCTGGTGCAGCTTGGGTGTCAACCGATTGTACCGGCAGT
GTTCATTGGCCAGCAGCTTGTTGGTGGTGCCAAGCAGGTCATGAGCCTCC
AAGTTACCAACCAGCTCAGCCATTTGCTTATAAGGGCCGGAGCCATTTGG
ATTTGATCCATCATGACATCCATTCTAGTTTATTTATAGTACTAGTTATT
TTATTTCAAAGTTTTATATTTCTGACGCCTCTGTTATTAGCTAGCTAGTT
TTACACCATGCATAATGGAGACGATTTCATGATAGCTTAATTTGTAAGTT
CATGTGGACTTTATTTTCTATCCATATTCATGTAACCTAGATAGCTCTTG
ATGAATATTATGTTATCTTCCATCAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
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